RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 FAM200BP0CF97 657 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 HOXD11P31277 338 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-211ENST00000506575 RPS9P46781 194 aaKnown RBP16.51■□□□□ 0.23
CLDND1-211ENST00000506575 SOX9P48436 509 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 MRE11P49959 708 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 SLC5A3P53794 718 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 TNK2Q07912 1038 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 PAK1Q13153 545 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 TTI2Q6NXR4 508 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 RALGPS2Q86X27 583 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-211ENST00000506575 SLC35C1Q96A29 364 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 CLDN23Q96B33 292 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 SLC22A12Q96S37 553 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 PHOX2BQ99453 314 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 DUSP9Q99956 384 aaKnown RBP16.51■□□□□ 0.23
CLDND1-211ENST00000506575 GCNT4Q9P109 453 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 KIAA1468Q9P260 1216 aa16.51■□□□□ 0.23
CLDND1-211ENST00000506575 PATJQ8NI35 1801 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 SHISA7A6NL88 538 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 STX17P56962 302 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 MAP3K7CLP57077 242 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 MTF1Q14872 753 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 PDGFRLQ15198 375 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 ZNF394Q53GI3 561 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 SH3RF2Q8TEC5 729 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 OVCA2Q8WZ82 227 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 CYFIP2Q96F07 1278 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
CLDND1-211ENST00000506575 SMOQ99835 787 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 FAM124BQ9H5Z6 455 aaPredicted RBP16.5■□□□□ 0.23
CLDND1-211ENST00000506575 CISHQ9NSE2 258 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 COMMD8Q9NX08 183 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 COQ4Q9Y3A0 265 aa16.5■□□□□ 0.23
CLDND1-211ENST00000506575 TNFRSF10BO14763 440 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 GNA14O95837 355 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 CTHP32929 405 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 IFNAR2P48551 515 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 FMO5P49326 533 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 YWHAEP62258 255 aaKnown RBP16.49■□□□□ 0.23
CLDND1-211ENST00000506575 CETN1Q12798 172 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 USP4Q13107 963 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 RUNX3Q13761 415 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 LRRC32Q14392 662 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 ZNF77Q15935 545 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 TRIM68Q6AZZ1 485 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 TATDN2Q93075 761 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 HEXIM2Q96MH2 286 aaKnown RBP16.49■□□□□ 0.23
CLDND1-211ENST00000506575 FBXO44Q9H4M3 255 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 EBF3Q9H4W6 596 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 LMAN1LQ9HAT1 526 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
CLDND1-211ENST00000506575 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
CLDND1-211ENST00000506575 MYO16Q9Y6X6 1858 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 FGFR1OPO95684 399 aaKnown RBP16.48■□□□□ 0.23
CLDND1-211ENST00000506575 NBL1P41271 181 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 AMPD2Q01433 879 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 LRMPQ12912 555 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 FZD5Q13467 585 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 CUL2Q13617 745 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 CPA6Q8N4T0 437 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 ARID3AQ99856 593 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 IER2Q9BTL4 223 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 HPS4Q9NQG7 708 aa16.48■□□□□ 0.23
CLDND1-211ENST00000506575 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
CLDND1-211ENST00000506575 BEST1O76090 585 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 OAS1P00973 400 aaKnown RBP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 ARSAP15289 507 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 TCF3P15923 654 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 TBXAS1P24557 533 aaPredicted RBP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 SLC7A9P82251 487 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 PON2Q15165 354 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 HECTD3Q5T447 861 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 PPP1R26Q5T8A7 1209 aaPredicted RBP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 CLEC20AQ6ZU45 233 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 ZNF687Q8N1G0 1237 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 EXOC4Q96A65 974 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
CLDND1-211ENST00000506575 NACA2Q9H009 215 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 CHRDQ9H2X0 955 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 IL37Q9NZH6 218 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 GMIPQ9P107 970 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms