RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 FAM92AA1XBS5 289 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 ZNF840PA6NDX5 716 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 TMEM221A6NGB7 291 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 HEPACAM2A8MVW5 462 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 M0R296 226 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 O00370 1275 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 PES1O00541 588 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 GPR37L1O60883 481 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 RTN3O95197 1032 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 VDRP11473 427 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 YWHAQP27348 245 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 GPC5P78333 572 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 IER5LQ5T953 404 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 RIN3Q8TB24 985 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 FBXO32Q969P5 355 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 VPS16Q9H269 839 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 TRPC7Q9HCX4 862 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 PNPLA8Q9NP80 782 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 SLC2A4RGQ9NR83 387 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 EHD2Q9NZN4 543 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 TSPAN16Q9UKR8 245 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 CCL26Q9Y258 94 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 COL4A3Q01955 1670 aa19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 SOBPA7XYQ1 873 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 BECN2A8MW95 431 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 TULP2O00295 520 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 LETM1O95202 739 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 PDGFBP01127 241 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 CFHP08603 1231 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 BRD2P25440 801 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 PGFP49763 221 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 COPB1P53618 953 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 TMEM31Q5JXX7 168 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 ENOSF1Q7L5Y1 443 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 APTXQ7Z2E3 356 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 ANKRD52Q8NB46 1076 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 USP13Q92995 863 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 CYP2S1Q96SQ9 504 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 NAT10Q9H0A0 1025 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 TRPM5Q9NZQ8 1165 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 GMIPQ9P107 970 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 ZMYM5Q9UJ78 669 aa19.28■□□□□ 0.68
PDLIM7-216ENST00000506537 HELZP42694 1942 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 ATP1A3P13637 1013 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 KRT5P13647 590 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 MFAP3P55082 362 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 ARHGAP44Q17R89 818 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 SKOR2Q2VWA4 1001 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 ZSCAN23Q3MJ62 389 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 PKDCCQ504Y2 493 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 HFE2Q6ZVN8 426 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 ARL14EPQ8N8R7 260 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 SHC3Q92529 594 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 SLITRK1Q96PX8 696 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 COMMD8Q9NX08 183 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 KIAA1257Q9ULG3 409 aa19.27■□□□□ 0.68
PDLIM7-216ENST00000506537 CYP26A1O43174 497 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 OAS1P00973 400 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 ZDHHC11BP0C7U3 371 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 PSMC3P17980 439 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 AVPR1AP37288 418 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 ZNF165P49910 485 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 KIF11P52732 1056 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 BCAT1P54687 386 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 PDE4CQ08493 712 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 FCHO2Q0JRZ9 810 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 IQCB1Q15051 598 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 LCLAT1Q6UWP7 414 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 PIGZQ86VD9 579 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 DEPDC1BQ8WUY9 529 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 OVCA2Q8WZ82 227 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 E2F7Q96AV8 911 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 LRFN3Q9BTN0 628 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 LSM14BQ9BX40 385 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 ACP6Q9NPH0 428 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 OBP2AQ9NY56 170 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 CHORDC1Q9UHD1 332 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 DNAJC12Q9UKB3 198 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 FHOD1Q9Y613 1164 aa19.26■□□□□ 0.67
PDLIM7-216ENST00000506537 TRAV19A0A0A6YYK7 116 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 KRBA1A5PL33 1030 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 LGALS16A8MUM7 142 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 PRR33A8MZF0 331 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 OLFM2O95897 454 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 CKMP06732 381 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 PNMA6AP0CW24 399 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 PPP3CCP48454 512 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 KLK7P49862 253 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 BST2Q10589 180 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 ZNF268Q14587 947 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 NFKBIBQ15653 356 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 KLHDC7AQ5VTJ3 777 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 CELF5Q8N6W0 485 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 PDZD8Q8NEN9 1154 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 UBA3Q8TBC4 463 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 FAM81BQ96LP2 452 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 TRMT61BQ9BVS5 477 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms