RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ANHXE9PGG2 379 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 F8VP50 259 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 CLDN5O00501 218 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ZBTB24O43167 697 aaPredicted RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 ASGR2P07307 311 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 FAM200BP0CF97 657 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 HMGA1P17096 107 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 GJA1P17302 382 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 CEBPBP17676 345 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 DDX6P26196 483 aaKnown RBP eCLIP7.7□□□□□ -1.18
GYPB-206ENST00000506516 CCR2P41597 374 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 GPR15P49685 360 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 MFAP3P55082 362 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ZXDAP98168 799 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 MYL5Q02045 173 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 GCNT1Q02742 428 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ORC1Q13415 861 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TEAD2Q15562 447 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 EXOC3L4Q17RC7 722 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 HSP90AA4PQ58FG1 418 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 SDHAF4Q5VUM1 108 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 RRAGAQ7L523 313 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ENOSF1Q7L5Y1 443 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TMC8Q8IU68 726 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 NPAS3Q8IXF0 933 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 FUKQ8N0W3 1084 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 NUP93Q8N1F7 819 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 SLC44A3Q8N4M1 653 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 C12orf29Q8N999 325 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 LMO3Q8TAP4 145 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 SLC2A14Q8TDB8 520 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ING5Q8WYH8 240 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 BAP1Q92560 729 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 MRPS31Q92665 395 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 SMARCD2Q92925 531 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 E2F7Q96AV8 911 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ELSPBP1Q96BH3 223 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TRMT2BQ96GJ1 504 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 MYRFLQ96LU7 910 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 HNRNPABQ99729 332 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 BPIFA3Q9BQP9 254 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 C1QTNF1Q9BXJ1 281 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 ZNF518BQ9C0D4 1074 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 INTS2Q9H0H0 1204 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 NDST4Q9H3R1 872 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TASP1Q9H6P5 420 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 UBE2TQ9NPD8 197 aaPredicted RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 DMAP1Q9NPF5 467 aaPredicted RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 SAMSN1Q9NSI8 373 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 COMMD8Q9NX08 183 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TRPM5Q9NZQ8 1165 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 GCNT4Q9P109 453 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 PCDHB4Q9Y5E5 795 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 NUMBLQ9Y6R0 609 aa7.7□□□□□ -1.18
GYPB-206ENST00000506516 TCF20Q9UGU0 1960 aaKnown RBP7.7□□□□□ -1.18
GYPB-206ENST00000506516 BECN2A8MW95 431 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 MOSPD3O75425 235 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ECI2O75521 394 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 RTN3O95197 1032 aaPredicted RBP7.69□□□□□ -1.18
GYPB-206ENST00000506516 F11P03951 625 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 PAEPP09466 180 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 VDRP11473 427 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 CCDC130P13994 396 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 SLC9A1P19634 815 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 YWHAQP27348 245 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ADORA2BP29275 332 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 AVPR1AP37288 418 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 PDE6CP51160 858 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 RAD23BP54727 409 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 MAP3K7CLP57077 242 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 HTR4Q13639 388 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 CCDC142Q17RM4 750 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ANO6Q4KMQ2 910 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 SGO2Q562F6 1265 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 GPR158Q5T848 1215 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
GYPB-206ENST00000506516 TMEM270Q6UE05 265 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 PARM1Q6UWI2 310 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 PAQR9Q6ZVX9 377 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 GAREM2Q75VX8 874 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 FAM35AQ86V20 835 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 SLC4A11Q8NBS3 891 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ZSCAN18Q8TBC5 510 aaPredicted RBP7.69□□□□□ -1.18
GYPB-206ENST00000506516 RSAD2Q8WXG1 361 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 FGF14Q92915 247 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ZSWIM3Q96MP5 696 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ASB16Q96NS5 453 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 SLITRK1Q96PX8 696 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 TWNKQ96RR1 684 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 KCNK16Q96T55 309 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ARHGAP9Q9BRR9 750 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 CRACR2AQ9BSW2 395 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 VPS16Q9H269 839 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 FBXO44Q9H4M3 255 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 ALG2Q9H553 416 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 EPHX3Q9H6B9 360 aa7.69□□□□□ -1.18
GYPB-206ENST00000506516 TRPV4Q9HBA0 871 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms