RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CD58P19256 250 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 ACADVLP49748 655 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
SCLT1-208ENST00000506368 KDSRQ06136 332 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 MAMLD1Q13495 774 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 TFDP3Q5H9I0 405 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 PADI6Q6TGC4 694 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 SPOCD1Q6ZMY3 1216 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 RFX8Q6ZV50 586 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 ANKMY2Q8IV38 441 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 GLIS1Q8NBF1 620 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 ACTRT2Q8TDY3 377 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 RBM38Q9H0Z9 239 aaKnown RBP16.56■□□□□ 0.24
SCLT1-208ENST00000506368 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
SCLT1-208ENST00000506368 USP29Q9HBJ7 922 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 CHMP2BQ9UQN3 213 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 SH3GLB1Q9Y371 365 aa16.56■□□□□ 0.24
SCLT1-208ENST00000506368 TLR3O15455 904 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ATP6V1G1O75348 118 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 USP1O94782 785 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 KRT1P04264 644 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 SPATA31D3P0C874 917 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ZSCAN5DPP0CG00 497 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 AQP4P55087 323 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TAP1Q03518 808 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 FOLH1Q04609 750 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TBL3Q12788 808 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TMED1Q13445 227 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 OGFRL1Q5TC84 451 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 RBM44Q6ZP01 1051 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 SPATA31D4Q6ZUB0 917 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 MAP7D3Q8IWC1 876 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ZBTB8BQ8NAP8 495 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TRPC4APQ8TEL6 797 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 AGBL1Q96MI9 1066 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 LBHD1Q9BQE6 289 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TEKT3Q9BXF9 490 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 C1orf112Q9NSG2 853 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 PAIP2BQ9ULR5 123 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 DAGLAQ9Y4D2 1042 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 hCG_1818297A0A087WSY0 165 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ARHGAP42A6NI28 874 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 SDR42E2A6NKP2 422 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 FDFT1P37268 417 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 GTF2IP78347 998 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 TMPRSS15P98073 1019 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 CXCL9Q07325 125 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 B3GNT9Q6UX72 402 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 SLC26A11Q86WA9 606 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ARID3BQ8IVW6 561 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 WDR75Q8IWA0 830 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 CPT1BQ92523 772 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 MFSD14AQ96MC6 490 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 SRPK1Q96SB4 655 aaKnown RBP16.55■□□□□ 0.24
SCLT1-208ENST00000506368 FAM118BQ9BPY3 351 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 LXNQ9BS40 222 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 BCAP29Q9UHQ4 241 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 PLLPQ9Y342 182 aa16.55■□□□□ 0.24
SCLT1-208ENST00000506368 GOLGA8RI6L899 631 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 SNNO75324 88 aaPredicted RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 TFAP2AP05549 437 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ADRB2P07550 413 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 BST1Q10588 318 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 DLG1Q12959 904 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 EFTUD2Q15029 972 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 HP1BP3Q5SSJ5 553 aaPredicted RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 GMCL1P1Q8NEA9 526 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 GSTCDQ8NEC7 633 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 SLC26A7Q8TE54 656 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 GAB3Q8WWW8 586 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 RIT2Q99578 217 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 FZD9O00144 591 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 CDK4P11802 303 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 PRDX6P30041 224 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 COPAP53621 1224 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 NR1H2P55055 460 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 AQP5P55064 265 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 NCKAP1LP55160 1127 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 KRT81Q14533 505 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 TRIP10Q15642 601 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 TEX44Q53QW1 395 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 OLFML2BQ68BL8 750 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 PLA2G4FQ68DD2 849 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 CPA5Q8WXQ8 436 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms