RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 GPR25O00155 361 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GNA14O95837 355 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 TP53P04637 393 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CASP2P42575 452 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ARSEP51690 589 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 SLC7A5Q01650 507 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 DSG1Q02413 1049 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MIER3Q7Z3K6 550 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 IQCKQ8N0W5 287 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 FAM156AQ8NDB6 213 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF397Q8NF99 534 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 EPN3Q9H201 632 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RNF181Q9P0P0 153 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 DNAJC12Q9UKB3 198 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PNMA8BQ9ULN7 279 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CXCL11O14625 94 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZSCAN12O43309 604 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ECEL1O95672 775 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CCND2P30279 289 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 SFNP31947 248 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CDH5P33151 784 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RXRGP48443 463 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GCLMP48507 274 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RPL34P49207 117 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 VAMP7P51809 220 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 KRT76Q01546 638 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GPNMBQ14956 572 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 EMC2Q15006 297 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 XKR4Q5GH76 650 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MAP1SQ66K74 1059 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CHST15Q7LFX5 561 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RAB44Q7Z6P3 723 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF687Q8N1G0 1237 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CRIPAKQ8N1N5 446 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GPR161Q8N6U8 529 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CASKIN2Q8WXE0 1202 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PIWIL1Q96J94 861 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 NAPGQ99747 312 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GBP3Q9H0R5 595 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 VPS45Q9NRW7 570 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GMIPQ9P107 970 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 HPCAL4Q9UM19 191 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 POLHQ9Y253 713 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 HYOU1Q9Y4L1 999 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 IQCA1LA6NCM1 817 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF233A6NK53 670 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 I6L893 689 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 K7ESF4 209 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 FTCDO95954 541 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 GCAP28676 217 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MAPK9P45984 424 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MTIF2P46199 727 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 JAK3P52333 1124 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 LSM11P83369 360 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 CYP1B1Q16678 543 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PRSS53Q2L4Q9 553 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 FAM182AQ5T1J6 154 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 EEF1DP3Q658K8 133 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MZT2AQ6P582 158 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 BHLHA9Q7RTU4 235 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PLPPR4Q7Z2D5 763 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RASSF3Q86WH2 238 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ERO1BQ86YB8 467 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 TAB3Q8N5C8 712 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RNF10Q8N5U6 811 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ACTRT1Q8TDG2 376 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 RIN2Q8WYP3 895 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ANP32BQ92688 251 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 DPF3Q92784 378 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 PPP1R14AQ96A00 147 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 OTUD5Q96G74 571 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ALG13Q9NP73 1137 aaKnown RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 TMEM30AQ9NV96 361 aa6.29□□□□□ -1.4
SCLT1-207ENST00000506233 ARMCX3Q9UH62 379 aaPredicted RBP6.29□□□□□ -1.4
SCLT1-207ENST00000506233 MBLAC1A4D2B0 266 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 GFPT2O94808 682 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CASQ1P31415 396 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CYP2C19P33261 490 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TCF7P36402 384 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 GTF2H3Q13889 308 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 FAM187BQ17R55 369 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 EXOC3L4Q17RC7 722 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 ARHGEF16Q5VV41 709 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 NSMFQ6X4W1 530 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 USP38Q8NB14 1042 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 ARRDC4Q8NCT1 418 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 HSPBAP1Q96EW2 488 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms