RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CLIC6Q96NY7 704 aa8.81□□□□□ -1
SNF8-204ENST00000506104 FIZ1Q96SL8 496 aa8.81□□□□□ -1
SNF8-204ENST00000506104 KIF2CQ99661 725 aa8.81□□□□□ -1
SNF8-204ENST00000506104 GCNT4Q9P109 453 aa8.81□□□□□ -1
SNF8-204ENST00000506104 CDH9Q9ULB4 789 aa8.81□□□□□ -1
SNF8-204ENST00000506104 ARHGAP26Q9UNA1 814 aa8.81□□□□□ -1
SNF8-204ENST00000506104 SH3BP1Q9Y3L3 701 aa8.81□□□□□ -1
SNF8-204ENST00000506104 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.81□□□□□ -1
SNF8-204ENST00000506104 STYXL1Q9Y6J8 313 aa8.81□□□□□ -1
SNF8-204ENST00000506104 TBC1D3BA6NDS4 549 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SOBPA7XYQ1 873 aa8.8□□□□□ -1
SNF8-204ENST00000506104 F8VP50 259 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SGK1O00141 431 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
SNF8-204ENST00000506104 TRIM66O15016 1216 aa8.8□□□□□ -1
SNF8-204ENST00000506104 PHACTR2O75167 634 aa8.8□□□□□ -1
SNF8-204ENST00000506104 KAT7O95251 611 aa8.8□□□□□ -1
SNF8-204ENST00000506104 ADH1CP00326 375 aa8.8□□□□□ -1
SNF8-204ENST00000506104 ADH5P11766 374 aa8.8□□□□□ -1
SNF8-204ENST00000506104 CEACAM1P13688 526 aa8.8□□□□□ -1
SNF8-204ENST00000506104 ENGP17813 658 aa8.8□□□□□ -1
SNF8-204ENST00000506104 TNNI1P19237 187 aa8.8□□□□□ -1
SNF8-204ENST00000506104 GARTP22102 1010 aa8.8□□□□□ -1
SNF8-204ENST00000506104 RDXP35241 583 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 GNL1P36915 607 aaPredicted RBP8.8□□□□□ -1
SNF8-204ENST00000506104 CASP5P51878 434 aa8.8□□□□□ -1
SNF8-204ENST00000506104 TNNC1P63316 161 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SIM1P81133 766 aaPredicted RBP8.8□□□□□ -1
SNF8-204ENST00000506104 RPL6Q02878 288 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 LMAN2Q12907 356 aa8.8□□□□□ -1
SNF8-204ENST00000506104 TAF10Q12962 218 aa8.8□□□□□ -1
SNF8-204ENST00000506104 TRPC3Q13507 836 aa8.8□□□□□ -1
SNF8-204ENST00000506104 DHCR24Q15392 516 aa8.8□□□□□ -1
SNF8-204ENST00000506104 MAPRE1Q15691 268 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 EOGTQ5NDL2 527 aa8.8□□□□□ -1
SNF8-204ENST00000506104 LYSMD4Q5XG99 296 aa8.8□□□□□ -1
SNF8-204ENST00000506104 BRAPQ7Z569 592 aa8.8□□□□□ -1
SNF8-204ENST00000506104 OR5B17Q8NGF7 314 aa8.8□□□□□ -1
SNF8-204ENST00000506104 FBXO32Q969P5 355 aa8.8□□□□□ -1
SNF8-204ENST00000506104 CCDC127Q96BQ5 260 aa8.8□□□□□ -1
SNF8-204ENST00000506104 FUBP3Q96I24 572 aaKnown RBP eCLIP8.8□□□□□ -1
SNF8-204ENST00000506104 MYRFLQ96LU7 910 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SLITRK1Q96PX8 696 aa8.8□□□□□ -1
SNF8-204ENST00000506104 RNF38Q9H0F5 515 aa8.8□□□□□ -1
SNF8-204ENST00000506104 ST6GALNAC4Q9H4F1 302 aa8.8□□□□□ -1
SNF8-204ENST00000506104 UPF2Q9HAU5 1272 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 CRTAC1Q9NQ79 661 aa8.8□□□□□ -1
SNF8-204ENST00000506104 EHD2Q9NZN4 543 aa8.8□□□□□ -1
SNF8-204ENST00000506104 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 SEL1LQ9UBV2 794 aa8.8□□□□□ -1
SNF8-204ENST00000506104 STK17AQ9UEE5 414 aa8.8□□□□□ -1
SNF8-204ENST00000506104 SIX4Q9UIU6 781 aa8.8□□□□□ -1
SNF8-204ENST00000506104 TNRC6BQ9UPQ9 1833 aaKnown RBP8.8□□□□□ -1
SNF8-204ENST00000506104 USP24Q9UPU5 2620 aa8.79□□□□□ -1
SNF8-204ENST00000506104 ZNF233A6NK53 670 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CLDN5O00501 218 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CDX4O14627 284 aaPredicted RBP8.79□□□□□ -1
SNF8-204ENST00000506104 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
SNF8-204ENST00000506104 HNRNPLP14866 589 aaKnown RBP eCLIP8.79□□□□□ -1
SNF8-204ENST00000506104 ITPKAP23677 461 aa8.79□□□□□ -1
SNF8-204ENST00000506104 PTGER3P43115 390 aa8.79□□□□□ -1
SNF8-204ENST00000506104 MAGEA11P43364 429 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CYP2J2P51589 502 aa8.79□□□□□ -1
SNF8-204ENST00000506104 MRPS21P82921 87 aaKnown RBP8.79□□□□□ -1
SNF8-204ENST00000506104 GFPT1Q06210 699 aaPredicted RBP8.79□□□□□ -1
SNF8-204ENST00000506104 BYSLQ13895 437 aaKnown RBP8.79□□□□□ -1
SNF8-204ENST00000506104 DUOXA2Q1HG44 320 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CFAP221Q4G0U5 840 aa8.79□□□□□ -1
SNF8-204ENST00000506104 LY6G5CQ5SRR4 150 aa8.79□□□□□ -1
SNF8-204ENST00000506104 C10orf76Q5T2E6 689 aa8.79□□□□□ -1
SNF8-204ENST00000506104 FAM173BQ6P4H8 233 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CCDC73Q6ZRK6 1079 aa8.79□□□□□ -1
SNF8-204ENST00000506104 STXBP4Q6ZWJ1 553 aa8.79□□□□□ -1
SNF8-204ENST00000506104 C12orf40Q86WS4 652 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CBWD2Q8IUF1 395 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CCDC65Q8IXS2 484 aa8.79□□□□□ -1
SNF8-204ENST00000506104 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
SNF8-204ENST00000506104 OR2I1PQ8NGU4 316 aa8.79□□□□□ -1
SNF8-204ENST00000506104 HPS3Q969F9 1004 aa8.79□□□□□ -1
SNF8-204ENST00000506104 JAKMIP2Q96AA8 810 aa8.79□□□□□ -1
SNF8-204ENST00000506104 PCED1BQ96HM7 432 aa8.79□□□□□ -1
SNF8-204ENST00000506104 FNBP1Q96RU3 617 aa8.79□□□□□ -1
SNF8-204ENST00000506104 PKMYT1Q99640 499 aa8.79□□□□□ -1
SNF8-204ENST00000506104 MRPL45Q9BRJ2 306 aaKnown RBP8.79□□□□□ -1
SNF8-204ENST00000506104 FGFBP2Q9BYJ0 223 aa8.79□□□□□ -1
SNF8-204ENST00000506104 DPEP3Q9H4B8 488 aa8.79□□□□□ -1
SNF8-204ENST00000506104 INTS13Q9NVM9 706 aa8.79□□□□□ -1
SNF8-204ENST00000506104 GDAP2Q9NXN4 497 aa8.79□□□□□ -1
SNF8-204ENST00000506104 CHORDC1Q9UHD1 332 aaPredicted RBP8.79□□□□□ -1
SNF8-204ENST00000506104 PCDHB9Q9Y5E1 797 aa8.79□□□□□ -1
SNF8-204ENST00000506104 ZNF840PA6NDX5 716 aa8.78□□□□□ -1
SNF8-204ENST00000506104 A8MXQ7 604 aa8.78□□□□□ -1
SNF8-204ENST00000506104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.78□□□□□ -1
SNF8-204ENST00000506104 CLIC2O15247 247 aa8.78□□□□□ -1
SNF8-204ENST00000506104 AP5Z1O43299 807 aa8.78□□□□□ -1
SNF8-204ENST00000506104 OPHN1O60890 802 aa8.78□□□□□ -1
SNF8-204ENST00000506104 NDUFS2O75306 463 aa8.78□□□□□ -1
SNF8-204ENST00000506104 PPP1R37O75864 691 aa8.78□□□□□ -1
SNF8-204ENST00000506104 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
SNF8-204ENST00000506104 HOXB2P14652 356 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms