RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
SIL1-208ENST00000505945 NXF1Q9UBU9 619 aaKnown RBP12.12□□□□□ -0.47
SIL1-208ENST00000505945 EBF1Q9UH73 591 aa12.12□□□□□ -0.47
SIL1-208ENST00000505945 PCDHGA5Q9Y5G8 931 aa12.12□□□□□ -0.47
SIL1-208ENST00000505945 CPQQ9Y646 472 aa12.12□□□□□ -0.47
SIL1-208ENST00000505945 PTPRDP23468 1912 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 A8MXQ7 604 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 POLR2DO15514 142 aaKnown RBP12.11□□□□□ -0.47
SIL1-208ENST00000505945 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 YEATS4O95619 227 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 GBP1P32455 592 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 SLC6A11P48066 632 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 PPP3CCP48454 512 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 SLC7A9P82251 487 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 CREB5Q02930 508 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 EHHADHQ08426 723 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 IFRD2Q12894 506 aaPredicted RBP12.11□□□□□ -0.47
SIL1-208ENST00000505945 TRPC3Q13507 836 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 ELF2Q15723 593 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
SIL1-208ENST00000505945 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
SIL1-208ENST00000505945 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
SIL1-208ENST00000505945 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 SFTPA1Q8IWL2 248 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 CCDC33Q8N5R6 958 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 TSTD1Q8NFU3 115 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 B3GNT5Q9BYG0 378 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 VPS45Q9NRW7 570 aa12.11□□□□□ -0.47
SIL1-208ENST00000505945 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 HELZP42694 1942 aaKnown RBP12.1□□□□□ -0.47
SIL1-208ENST00000505945 PHACTR2O75167 634 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CAVIN2O95810 425 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 OLFM2O95897 454 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 OAS1P00973 400 aaKnown RBP12.1□□□□□ -0.47
SIL1-208ENST00000505945 CYP17A1P05093 508 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 AFMP43652 599 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CASP4P49662 377 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CDH8P55286 799 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 SNRPFP62306 86 aaKnown RBP12.1□□□□□ -0.47
SIL1-208ENST00000505945 MESP2Q0VG99 397 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 DHCR24Q15392 516 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 N4BP2L1Q5TBK1 243 aaPredicted RBP12.1□□□□□ -0.47
SIL1-208ENST00000505945 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 RHBDF2Q6PJF5 856 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CCDC26Q8TAB7 109 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 SLITRK1Q96PX8 696 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 TPSD1Q9BZJ3 242 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 ELOVL4Q9GZR5 314 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
SIL1-208ENST00000505945 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 UBE4BO95155 1302 aa12.1□□□□□ -0.47
SIL1-208ENST00000505945 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 BCLAF3A2AJT9 711 aaKnown RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 EXOC3O60645 756 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 MBL2P11226 248 aaPredicted RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 YWHAQP27348 245 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 ATICP31939 592 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 CUL4BQ13620 913 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 CRY1Q16526 586 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 KNOP1Q1ED39 458 aaKnown RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 USP39Q53GS9 565 aaKnown RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 RNF43Q68DV7 783 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 SCAMP5Q8TAC9 235 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
SIL1-208ENST00000505945 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 SMYD3Q9H7B4 428 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 GON4LQ3T8J9 2241 aa12.09□□□□□ -0.47
SIL1-208ENST00000505945 USP24Q9UPU5 2620 aa12.08□□□□□ -0.47
SIL1-208ENST00000505945 LAMA1P25391 3075 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 COCHO43405 550 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 CLSTN1O94985 981 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 HNRNPLP14866 589 aaKnown RBP eCLIP12.08□□□□□ -0.48
SIL1-208ENST00000505945 BCKDHBP21953 392 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 TIE1P35590 1138 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 MRPS21P82921 87 aaKnown RBP12.08□□□□□ -0.48
SIL1-208ENST00000505945 BIRC3Q13489 604 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 EMC10Q5UCC4 262 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 PAQR9Q6ZVX9 377 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 C12orf40Q86WS4 652 aa12.08□□□□□ -0.48
SIL1-208ENST00000505945 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms