RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 B3GALNT2Q8NCR0 500 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 CNTNAP3BQ96NU0 1288 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 CNTNAP3Q9BZ76 1288 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 SMOC1Q9H4F8 434 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 SMYD3Q9H7B4 428 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 RXFP3Q9NSD7 469 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 EHD2Q9NZN4 543 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
SNHG4-202ENST00000505522 CPQQ9Y646 472 aa13□□□□□ -0.33
SNHG4-202ENST00000505522 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 K7EQS6 105 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 DCLK1O15075 740 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 ACTN4O43707 911 aaKnown RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 KLRC4O43908 158 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 FOXD2O60548 495 aaPredicted RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 PHACTR2O75167 634 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 APBB3O95704 486 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 OLFM2O95897 454 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 CYP17A1P05093 508 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 PPP3CCP48454 512 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 STK4Q13043 487 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 AASDHQ4L235 1098 aaPredicted RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 PPM1JQ5JR12 505 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 PAQR9Q6ZVX9 377 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 ADGRG2Q8IZP9 1017 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 KIAA0895Q8NCT3 520 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 ACDQ96AP0 544 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 ZC3H10Q96K80 434 aaKnown RBP12.99□□□□□ -0.33
SNHG4-202ENST00000505522 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 EBF1Q9UH73 591 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 SERTAD1Q9UHV2 236 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 LAMA1P25391 3075 aa12.99□□□□□ -0.33
SNHG4-202ENST00000505522 VNN1O95497 513 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
SNHG4-202ENST00000505522 SEC13P55735 322 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 CLDN10P78369 228 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
SNHG4-202ENST00000505522 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 BIRC3Q13489 604 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 ZNF699Q32M78 642 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 PLK5Q496M5 336 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 SCARA5Q6ZMJ2 495 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 SFTPA1Q8IWL2 248 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 C12orf50Q8NA57 414 aaPredicted RBP12.98□□□□□ -0.33
SNHG4-202ENST00000505522 PAGE5Q96GU1 130 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 SLITRK1Q96PX8 696 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 KCNK16Q96T55 309 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 DUSP15Q9H1R2 295 aaPredicted RBP12.98□□□□□ -0.33
SNHG4-202ENST00000505522 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 CFAP97Q9P2B7 532 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 INVSQ9Y283 1065 aa12.98□□□□□ -0.33
SNHG4-202ENST00000505522 TNFRSF10BO14763 440 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
SNHG4-202ENST00000505522 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
SNHG4-202ENST00000505522 ADRB1P08588 477 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
SNHG4-202ENST00000505522 YWHAQP27348 245 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 MPLP40238 635 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SLC6A11P48066 632 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 LIMK1P53667 647 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 DLG4P78352 724 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 NCOA4Q13772 614 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 DHCR24Q15392 516 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 C12orf40Q86WS4 652 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 CCDC33Q8N5R6 958 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 TSTD1Q8NFU3 115 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 GOLGA5Q8TBA6 731 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
SNHG4-202ENST00000505522 KCTD10Q9H3F6 313 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 EXOC1Q9NV70 894 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
SNHG4-202ENST00000505522 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SPAG17Q6Q759 2223 aa12.97□□□□□ -0.33
SNHG4-202ENST00000505522 SLC9A3R1O14745 358 aaPredicted RBP12.96□□□□□ -0.33
SNHG4-202ENST00000505522 TM4SF5O14894 197 aa12.96□□□□□ -0.33
SNHG4-202ENST00000505522 COCHO43405 550 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms