RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CCDC151A5D8V7 595 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 E7ENX8 843 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 TRIM27P14373 513 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 GPD1P21695 349 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 EVA1CP58658 441 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 AMPD3Q01432 767 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 TAP2Q03519 686 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 SRSF4Q08170 494 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 MVPQ14764 893 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 C20orf194Q5TEA3 1177 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 GADL1Q6ZQY3 521 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 C8orf58Q8NAV2 365 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 FRAT1Q92837 279 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 ZNF778Q96MU6 729 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 KLC4Q9NSK0 619 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 RNF7Q9UBF6 113 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 DKK3Q9UBP4 350 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 PCDH11XQ9BZA7 1347 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 PCDH11YQ9BZA8 1340 aa5.98□□□□□ -1.45
DEPDC1B-203ENST00000505017 JCADQ9P266 1359 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 PHKG2P15735 406 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 FXR1P51114 621 aaKnown RBP eCLIP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 ATXN1P54253 815 aaKnown RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 PSMC1P62191 440 aaKnown RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 ITKQ08881 620 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 CCDC30Q5VVM6 783 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 TAF2Q6P1X5 1199 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 SLC4A10Q6U841 1118 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 SLC30A10Q6XR72 485 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 CENPQQ7L2Z9 268 aaPredicted RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 FAM90A1Q86YD7 464 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 PDSS2Q86YH6 399 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 TSPYL6Q8N831 410 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 ZCRB1Q8TBF4 217 aaKnown RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 SCAMP4Q969E2 229 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 NAF1Q96HR8 494 aaKnown RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 AMBRA1Q9C0C7 1298 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 NOB1Q9ULX3 412 aaKnown RBP5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 WNK3Q9BYP7 1800 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 ABCC4O15439 1325 aa5.97□□□□□ -1.45
DEPDC1B-203ENST00000505017 NRAPQ86VF7 1730 aa5.96□□□□□ -1.45
DEPDC1B-203ENST00000505017 HEG1Q9ULI3 1381 aa5.96□□□□□ -1.45
DEPDC1B-203ENST00000505017 N4BP2Q86UW6 1770 aaPredicted RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 SHTN1A0MZ66 631 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 ERVV-2B6SEH9 535 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 POLRMTO00411 1230 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 ANXA1P04083 346 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 GJB1P08034 283 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 CELA2AP08217 269 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 PHKA1P46020 1223 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 EIF4A1P60842 406 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 PIGFQ07326 219 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 TCF15Q12870 199 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 BOP1Q14137 746 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 HABP2Q14520 560 aaPredicted RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 UAP1L1Q3KQV9 507 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 RASAL3Q86YV0 1011 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 PRPF38AQ8NAV1 312 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 MTMR8Q96EF0 704 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 C1QTNF7Q9BXJ2 289 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 TMX1Q9H3N1 280 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 GPR35Q9HC97 309 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 SERGEFQ9UGK8 458 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 THRAP3Q9Y2W1 955 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 CFAP20Q9Y6A4 193 aaKnown RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 DISP2A7MBM2 1401 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 KDM6AO15550 1401 aaPredicted RBP5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 SHANK3Q9BYB0 1731 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 PXDNLA1KZ92 1463 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 LRP6O75581 1613 aa5.96□□□□□ -1.46
DEPDC1B-203ENST00000505017 A0A0B4J269 797 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 ZNF785A8K8V0 405 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 JUPP14923 745 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 PRDX5P30044 214 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 NXPH1P58417 271 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 EXOSC10Q01780 885 aaKnown RBP5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 ITIH3Q06033 890 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 TUBB3Q13509 450 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 FAM109AQ8N4B1 249 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 B3GALNT2Q8NCR0 500 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 HASPINQ8TF76 798 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 SCARB1Q8WTV0 552 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 SMOQ99835 787 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 SERHLQ9NQF3 203 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 KMT5AQ9NQR1 393 aa5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 SIDT1Q9NXL6 827 aaKnown RBP5.95□□□□□ -1.46
DEPDC1B-203ENST00000505017 SLIT2O94813 1529 aa5.94□□□□□ -1.46
DEPDC1B-203ENST00000505017 IBTKQ9P2D0 1353 aaPredicted RBP5.94□□□□□ -1.46
DEPDC1B-203ENST00000505017 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.94□□□□□ -1.46
DEPDC1B-203ENST00000505017 TNS2Q63HR2 1409 aa5.94□□□□□ -1.46
DEPDC1B-203ENST00000505017 CHRM3P20309 590 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms