RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MAGEA11P43364 429 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 MLLT6P55198 1093 aaPredicted RBP14.03□□□□□ -0.16
DDX41-204ENST00000504807 CLDN10P78369 228 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CYP27A1Q02318 531 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 MYO1EQ12965 1108 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CCINQ13939 588 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 ZNF77Q15935 545 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 PLA2G2CQ5R387 149 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 FSTL4Q6MZW2 842 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 DPH6Q7L8W6 267 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 ARL14EPQ8N8R7 260 aaPredicted RBP14.03□□□□□ -0.16
DDX41-204ENST00000504807 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CSGALNACT1Q8TDX6 532 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 LOXL4Q96JB6 756 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 ZNF518BQ9C0D4 1074 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 HMGXB4Q9UGU5 601 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
DDX41-204ENST00000504807 EXOC3O60645 756 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 TACC1O75410 805 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.17
DDX41-204ENST00000504807 PCSK1P29120 753 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 PGFP49763 221 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 RPL10AP62906 217 aaKnown RBP14.02□□□□□ -0.17
DDX41-204ENST00000504807 USP4Q13107 963 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 ORC1Q13415 861 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 SURF1Q15526 300 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 TAF12Q16514 161 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 WDR72Q3MJ13 1102 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 PAQR9Q6ZVX9 377 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 CACNA2D4Q7Z3S7 1137 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 WDR5BQ86VZ2 330 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 MYCBPAPQ8TBZ2 947 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 FUBP3Q96I24 572 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDX41-204ENST00000504807 SPATA32Q96LK8 384 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 BBC3Q96PG8 261 aaPredicted RBP14.02□□□□□ -0.17
DDX41-204ENST00000504807 GCNAQ96QF7 691 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 C8orf33Q9H7E9 229 aaPredicted RBP14.02□□□□□ -0.17
DDX41-204ENST00000504807 TRPC7Q9HCX4 862 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 VPS45Q9NRW7 570 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 TDP1Q9NUW8 608 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 NXF1Q9UBU9 619 aaKnown RBP14.02□□□□□ -0.17
DDX41-204ENST00000504807 GPSM3Q9Y4H4 160 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 WNT6Q9Y6F9 365 aa14.02□□□□□ -0.17
DDX41-204ENST00000504807 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 F8VP50 259 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 SCAMP3O14828 347 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 RPP40O75818 363 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 PAPSS2O95340 614 aaPredicted RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 STAU1O95793 577 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 PTPN1P18031 435 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 AVPR1AP37288 418 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 PXNP49023 591 aaPredicted RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 SNRPFP62306 86 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 DPYDQ12882 1025 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 COL28A1Q2UY09 1125 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 GAB4Q2WGN9 574 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 ITPRIPL2Q3MIP1 535 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 DAB2IPQ5VWQ8 1189 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 SCARA5Q6ZMJ2 495 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 HS2ST1Q7LGA3 356 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 RALGPS2Q86X27 583 aaPredicted RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 OR6B3Q8NGW1 331 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 FNBP1Q96RU3 617 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 RNF38Q9H0F5 515 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 LINC00597Q9H2U6 94 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.171e-21■■■■■ 521.7
DDX41-204ENST00000504807 EXOC1Q9NV70 894 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 MAGEC2Q9UBF1 373 aaPredicted RBP14.01□□□□□ -0.17
DDX41-204ENST00000504807 KLK13Q9UKR3 277 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
DDX41-204ENST00000504807 EGFP01133 1207 aa14□□□□□ -0.17
DDX41-204ENST00000504807 NR3C1P04150 777 aa14□□□□□ -0.17
DDX41-204ENST00000504807 CCDC192P0DO97 292 aa14□□□□□ -0.17
DDX41-204ENST00000504807 DDX6P26196 483 aaKnown RBP eCLIP14□□□□□ -0.17
DDX41-204ENST00000504807 GRIK1P39086 918 aa14□□□□□ -0.17
DDX41-204ENST00000504807 MESP2Q0VG99 397 aa14□□□□□ -0.17
DDX41-204ENST00000504807 RUNX3Q13761 415 aa14□□□□□ -0.17
DDX41-204ENST00000504807 ZNF268Q14587 947 aaPredicted RBP14□□□□□ -0.17
DDX41-204ENST00000504807 MTF1Q14872 753 aa14□□□□□ -0.17
DDX41-204ENST00000504807 SLC9A9Q8IVB4 645 aa14□□□□□ -0.17
DDX41-204ENST00000504807 TTC16Q8NEE8 873 aa14□□□□□ -0.17
DDX41-204ENST00000504807 ADAM32Q8TC27 787 aa14□□□□□ -0.17
DDX41-204ENST00000504807 TMEM174Q8WUU8 243 aa14□□□□□ -0.17
DDX41-204ENST00000504807 GAB3Q8WWW8 586 aa14□□□□□ -0.17
DDX41-204ENST00000504807 SPATA17Q96L03 361 aa14□□□□□ -0.17
DDX41-204ENST00000504807 KCNK16Q96T55 309 aa14□□□□□ -0.17
DDX41-204ENST00000504807 TTLL2Q9BWV7 592 aa14□□□□□ -0.17
DDX41-204ENST00000504807 VRTNQ9H8Y1 702 aa14□□□□□ -0.17
DDX41-204ENST00000504807 NEUROG3Q9Y4Z2 214 aa14□□□□□ -0.17
DDX41-204ENST00000504807 PCDHGA5Q9Y5G8 931 aa14□□□□□ -0.17
DDX41-204ENST00000504807 HELZP42694 1942 aaKnown RBP14□□□□□ -0.17
DDX41-204ENST00000504807 AKAP3O75969 853 aa13.99□□□□□ -0.17
DDX41-204ENST00000504807 BEST1O76090 585 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms