RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 YWHAQP27348 245 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 PSMC2P35998 433 aaKnown RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 IFNAR2P48551 515 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 VAMP7P51809 220 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 USP46P62068 366 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 DLG4P78352 724 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 TAF10Q12962 218 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 CCINQ13939 588 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 MTF1Q14872 753 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 ZACNQ401N2 412 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 TMEM196Q5HYL7 178 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 GUF1Q8N442 669 aaKnown RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 SH3RF2Q8TEC5 729 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 ATP2A3Q93084 1043 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 KCNK16Q96T55 309 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 P2RY13Q9BPV8 354 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 LINC00597Q9H2U6 94 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 ECT2Q9H8V3 914 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 HPS4Q9NQG7 708 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 SEMA4GQ9NTN9 838 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 CHORDC1Q9UHD1 332 aaPredicted RBP12.71□□□□□ -0.37
MED28-203ENST00000503945 ARHGAP26Q9UNA1 814 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 NME7Q9Y5B8 376 aa12.71□□□□□ -0.37
MED28-203ENST00000503945 NUP210Q8TEM1 1887 aaPredicted RBP12.7□□□□□ -0.38
MED28-203ENST00000503945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
MED28-203ENST00000503945 CLDN5O00501 218 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 SLC30A4O14863 429 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 GDF9O60383 454 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 TADA3O75528 432 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 VNN1O95497 513 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 ARSAP15289 507 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 DRD1P21728 446 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 CNR2P34972 360 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 GJA4P35212 333 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 NUCB2P80303 420 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 NFIL3Q16649 462 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 HEATR6Q6AI08 1181 aaKnown RBP12.7□□□□□ -0.38
MED28-203ENST00000503945 Q6ZS52 159 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 LONP2Q86WA8 852 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 SMYD3Q9H7B4 428 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 COMMD8Q9NX08 183 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
MED28-203ENST00000503945 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
MED28-203ENST00000503945 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
MED28-203ENST00000503945 LRP3O75074 770 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 AKAP3O75969 853 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 PAPSS2O95340 614 aaPredicted RBP12.69□□□□□ -0.38
MED28-203ENST00000503945 ADRB1P08588 477 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 TCF3P15923 654 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 SLC7A9P82251 487 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 ENPEPQ07075 957 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
MED28-203ENST00000503945 ZNF77Q15935 545 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 CSRP2Q16527 193 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 ADGRG2Q8IZP9 1017 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 PDZD8Q8NEN9 1154 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 ELMO3Q96BJ8 720 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
MED28-203ENST00000503945 SLC8A2Q9UPR5 921 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 WNT6Q9Y6F9 365 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 ACACBO00763 2458 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
MED28-203ENST00000503945 TCHHQ07283 1943 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 GREB1Q4ZG55 1949 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 EPG5Q9HCE0 2579 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 LEFTY2O00292 366 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 CETN3O15182 167 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 SMC2O95347 1197 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 NFATC1O95644 943 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
MED28-203ENST00000503945 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 HOXA6P31267 233 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 GTF2H1P32780 548 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 GCLMP48507 274 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 NDST1P52848 882 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 EML3Q32P44 896 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 PPM1JQ5JR12 505 aa12.68□□□□□ -0.38
MED28-203ENST00000503945 HECTD3Q5T447 861 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms