RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SARDHQ9UL12 918 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PADI4Q9UM07 663 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CENPBD1B2RD01 187 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CASQ2O14958 399 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ALOX5P09917 674 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DNAJB2P25686 324 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SFNP31947 248 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADCY1Q08828 1119 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF844Q08AG5 666 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 STK3Q13188 491 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADAM9Q13443 819 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SPARCL1Q14515 664 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 STAT4Q14765 748 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TTMPQ5BVD1 217 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MPP7Q5T2T1 576 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ARHGAP36Q6ZRI8 547 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NANOGNBQ7Z5D8 188 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT77Q7Z794 578 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZC3H18Q86VM9 953 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NPAS4Q8IUM7 802 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SCYL3Q8IZE3 742 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PGBD3Q8N328 593 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 USP38Q8NB14 1042 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SNX27Q96L92 541 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.92□□□□□ -1.942e-6■■■□□ 17.3
NEDD4-204ENST00000503468 TLR10Q9BXR5 811 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MOV10Q9HCE1 1003 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PREBQ9HCU5 417 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 GKN1Q9NS71 199 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 VPS28Q9UK41 221 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 IGLV3-16A0A075B6K0 115 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM238LA0A1B0GVL6 79 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SH3PXD2BA1X283 911 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HTR3EA5X5Y0 456 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 A6NJY4 79 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 F8VZ95 297 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FZD6O60353 706 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 NOL3O60936 208 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 C22orf31O95567 290 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ECEL1O95672 775 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OATP04181 439 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ATP1A1P05023 1023 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GLI1P08151 1106 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ASNSP08243 561 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 NID1P14543 1247 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CCNB1P14635 433 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HSD17B3P37058 310 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PTPN9P43378 593 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 RBM5P52756 815 aaKnown RBP eCLIP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 POLGP54098 1239 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CABP4P57796 275 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SPCS2Q15005 226 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 RGS21Q2M5E4 152 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF658Q5TYW1 1059 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 RRAGBQ5VZM2 374 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 NXNQ6DKJ4 435 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CYP2U1Q7Z449 544 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 DDX54Q8TDD1 881 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MAML1Q92585 1016 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ANKRD36BP1Q96IX9 119 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CAPZA3Q96KX2 299 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FAM167BQ9BTA0 163 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PITPNM3Q9BZ71 974 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC8Q9H0W5 538 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CHST7Q9NS84 486 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FAIMQ9NVQ4 179 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 EXOC7Q9UPT5 735 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 AP4S1Q9Y587 144 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OR51B4Q9Y5P0 310 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 C2CD2LO14523 706 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MAGEC1O60732 1142 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MAFO75444 373 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MAGEA11P43364 429 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CARSP49589 748 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 AP3M2P53677 418 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GRIK2Q13002 908 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SLC39A6Q13433 755 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 UBXN11Q5T124 520 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TRIM68Q6AZZ1 485 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ENOSF1Q7L5Y1 443 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 COLGALT2Q8IYK4 626 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ARHGEF39Q8N4T4 335 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.91□□□□□ -1.949e-9■■■■■ 41.5
NEDD4-204ENST00000503468 HCAR2Q8TDS4 363 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 UBLCP1Q8WVY7 318 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GATA6Q92908 595 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC138Q96M89 665 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF570Q96NI8 536 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC85AQ96PX6 553 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SERINC2Q96SA4 455 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TUBGCP2Q9BSJ2 902 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ASB7Q9H672 318 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GPAMQ9HCL2 828 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 COL20A1Q9P218 1284 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SEPT3Q9UH03 358 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 AK5Q9Y6K8 562 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM221A6NGB7 291 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 EIF3FO00303 357 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PIRO00625 290 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms