RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 MBD1Q9UIS9 605 aaPredicted RBP13.91□□□□□ -0.18
TRIO-205ENST00000503399 KLK13Q9UKR3 277 aa13.91□□□□□ -0.18
TRIO-205ENST00000503399 CDH9Q9ULB4 789 aa13.91□□□□□ -0.18
TRIO-205ENST00000503399 AKAP13Q12802 2813 aa13.91□□□□□ -0.18
TRIO-205ENST00000503399 SLC9A3R1O14745 358 aaPredicted RBP13.9□□□□□ -0.18
TRIO-205ENST00000503399 ADH1CP00326 375 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 IDEP14735 1019 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 GAP43P17677 238 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 PFKLP17858 780 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 ACAP1Q15027 740 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 MAPRE1Q15691 268 aaKnown RBP13.9□□□□□ -0.18
TRIO-205ENST00000503399 HDDC3Q8N4P3 179 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 CXorf38Q8TB03 319 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 KBTBD7Q8WVZ9 684 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 HPDLQ96IR7 371 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 STRA6Q9BX79 667 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 RNF38Q9H0F5 515 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 PPP4R2Q9NY27 417 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 NEUROG3Q9Y4Z2 214 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
TRIO-205ENST00000503399 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
TRIO-205ENST00000503399 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 F8VP50 259 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 TRIM66O15016 1216 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 TNNC2P02585 160 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
TRIO-205ENST00000503399 ADH5P11766 374 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 GARTP22102 1010 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 ITPKAP23677 461 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
TRIO-205ENST00000503399 PI4KAP42356 2102 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 CASP5P51878 434 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 SLC7A9P82251 487 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 RING1Q06587 406 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
TRIO-205ENST00000503399 MAP7D1Q3KQU3 841 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 HSF5Q4G112 596 aaPredicted RBP13.89□□□□□ -0.19
TRIO-205ENST00000503399 MDH1BQ5I0G3 518 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 HS2ST1Q7LGA3 356 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 ADGRG2Q8IZP9 1017 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 PCED1BQ96HM7 432 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 STK17AQ9UEE5 414 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
TRIO-205ENST00000503399 PKD1L2Q7Z442 2459 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 ADAMTS9Q9P2N4 1935 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 ADAM23O75077 832 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 GRIA2P42262 883 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 DPP6P42658 865 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 KIR2DL1P43626 348 aaPredicted RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 GFPT1Q06210 699 aaPredicted RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 TAF10Q12962 218 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 LARP1BQ659C4 914 aaKnown RBP13.88□□□□□ -0.19
TRIO-205ENST00000503399 SLC23A3Q6PIS1 610 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 SV2BQ7L1I2 683 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 DPH6Q7L8W6 267 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 DDX42Q86XP3 938 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIO-205ENST00000503399 GPD1LQ8N335 351 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 SNX25Q9H3E2 840 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 PILRBQ9UKJ0 227 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 MSRB2Q9Y3D2 182 aa13.88□□□□□ -0.19
TRIO-205ENST00000503399 TBC1D3BA6NDS4 549 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 AP5Z1O43299 807 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 OPHN1O60890 802 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 PRPF6O94906 941 aaKnown RBP13.87□□□□□ -0.19
TRIO-205ENST00000503399 OLFM2O95897 454 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
TRIO-205ENST00000503399 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
TRIO-205ENST00000503399 TXLNAP40222 546 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 PPP3CCP48454 512 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
TRIO-205ENST00000503399 SEMA3BQ13214 749 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 RABEP1Q15276 862 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 DUOXA1Q1HG43 343 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
TRIO-205ENST00000503399 BTBD8Q5XKL5 378 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms