RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 TRIM61Q5EBN2 209 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 EOGTQ5NDL2 527 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 RRAGBQ5VZM2 374 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 LMBRD2Q68DH5 695 aaPredicted RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 SLC23A3Q6PIS1 610 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 SYT12Q8IV01 421 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 SYCP3Q8IZU3 236 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 ALLCQ8N6M5 410 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 MYCBPAPQ8TBZ2 947 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 PIGKQ92643 395 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 PCED1BQ96HM7 432 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 C8orf48Q96LL4 319 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 NUSAP1Q9BXS6 441 aaKnown RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 POLMQ9NP87 494 aaPredicted RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 SRPRBQ9Y5M8 271 aaKnown RBP14.65□□□□□ -0.06
DDR1-247ENST00000502955 CPQQ9Y646 472 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 PTPRJQ12913 1337 aa14.65□□□□□ -0.06
DDR1-247ENST00000502955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 SGK1O00141 431 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 TOP3BO95985 862 aaKnown RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 TNNC2P02585 160 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 APODP05090 189 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 FAM163BP0C2L3 166 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 SPINK2P20155 84 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 GRIA2P42262 883 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 CYP27A1Q02318 531 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 MESP2Q0VG99 397 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 RESTQ13127 1097 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 BYSLQ13895 437 aaKnown RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 SURF1Q15526 300 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 DUOXA2Q1HG44 320 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 RHBDF2Q6PJF5 856 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 PIP4P1Q86T03 277 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 DDX42Q86XP3 938 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDR1-247ENST00000502955 SFTPA1Q8IWL2 248 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 PHTF2Q8N3S3 785 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 TXNDC5Q8NBS9 432 aaKnown RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 OR5B17Q8NGF7 314 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 KCNV2Q8TDN2 545 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 DUSP9Q99956 384 aaKnown RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 FGFBP2Q9BYJ0 223 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 PCIF1Q9H4Z3 704 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 SLC32A1Q9H598 525 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 TMEM74BQ9NUR3 256 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 MBD1Q9UIS9 605 aaPredicted RBP14.64□□□□□ -0.07
DDR1-247ENST00000502955 NEUROG3Q9Y4Z2 214 aa14.64□□□□□ -0.07
DDR1-247ENST00000502955 MYOFQ9NZM1 2061 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 ZNF233A6NK53 670 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 F8VP50 259 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 ADAM23O75077 832 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 TACC1O75410 805 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 KLF8O95600 359 aaPredicted RBP14.63□□□□□ -0.07
DDR1-247ENST00000502955 ADH1CP00326 375 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 TIE1P35590 1138 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 TXLNAP40222 546 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 PTGER3P43115 390 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 SLC6A11P48066 632 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 UAP1L1Q3KQV9 507 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 C12orf40Q86WS4 652 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 WDR49Q8IV35 697 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 DEFB124Q8NES8 71 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 RLN3Q8WXF3 142 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 OVCA2Q8WZ82 227 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 OTUB2Q96DC9 234 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 SLITRK1Q96PX8 696 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 TBC1D14Q9P2M4 693 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 PILRBQ9UKJ0 227 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 CLIC4Q9Y696 253 aa14.63□□□□□ -0.07
DDR1-247ENST00000502955 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
DDR1-247ENST00000502955 GON4LQ3T8J9 2241 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 DSPP15924 2871 aaKnown RBP14.62□□□□□ -0.07
DDR1-247ENST00000502955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 E2F8A0AVK6 867 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 SRRM3A6NNA2 597 aaPredicted RBP14.62□□□□□ -0.07
DDR1-247ENST00000502955 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
DDR1-247ENST00000502955 MAP3K13O43283 966 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 PDGFRBP09619 1106 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 ADH5P11766 374 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 IDEP14735 1019 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 ENGP17813 658 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 TAF10Q12962 218 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 SEMA3BQ13214 749 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 TDRD10Q5VZ19 366 aaKnown RBP14.62□□□□□ -0.07
DDR1-247ENST00000502955 LYSMD4Q5XG99 296 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 TTC30AQ86WT1 665 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 TMEFF1Q8IYR6 380 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 ELOVL4Q9GZR5 314 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 KIAA1586Q9HCI6 787 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 ARHGEF4Q9NR80 690 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 TMEM30AQ9NV96 361 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 PANK4Q9NVE7 773 aa14.62□□□□□ -0.07
DDR1-247ENST00000502955 SMPD4Q9NXE4 827 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms