RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 C6orf89Q6UWU4 347 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 MYLK4Q86YV6 388 aaPredicted RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 ALG3Q92685 438 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 MMTAG2Q9BU76 263 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 DDX28Q9NUL7 540 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 STK25O00506 426 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 FSCN2O14926 492 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 KRT75O95678 551 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 MAPTP10636 758 aaKnown RBP17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 KYQ8NBH2 561 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 SATB2Q9UPW6 733 aa17.85■□□□□ 0.45
HMGXB3-201ENST00000502717 PDAP1Q13442 181 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 XKR3Q5GH77 459 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 TRABD2AQ86V40 505 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 OR6Y1Q8NGX8 325 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 SNX13Q9Y5W8 968 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 M0R3G1 203 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 GPD1P21695 349 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 SERPINB1P30740 379 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 ELK3P41970 407 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 MRPS15P82914 257 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 KATNAL2Q8IYT4 538 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 PRPF18Q99633 342 aaKnown RBP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 NID2Q14112 1375 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 SMNDC1O75940 238 aaKnown RBP eCLIP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 CYP1A2P05177 515 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 C16orf72Q14CZ0 275 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 STXBP2Q15833 593 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 DACT3Q96B18 629 aaPredicted RBP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 MAGEB5Q9BZ81 275 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 KCTD10Q9H3F6 313 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 DNPEPQ9ULA0 475 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 ZMYM2Q9UBW7 1377 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 NOL4O94818 638 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 RNF220Q5VTB9 566 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 DDIASQ8IXT1 998 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 NAT9Q9BTE0 207 aa17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 SCHIP1Q9P0W5 487 aaPredicted RBP17.84■□□□□ 0.45
HMGXB3-201ENST00000502717 DDX3YO15523 660 aaKnown RBP17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 ARHGEF9O43307 516 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 FDX1P10109 184 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 MARCKSL1P49006 195 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 AASDHQ4L235 1098 aaPredicted RBP17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 CYP4A22Q5TCH4 519 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 PATL1Q86TB9 770 aaKnown RBP17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 CDR2LQ86X02 465 aaPredicted RBP17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 RNF135Q8IUD6 432 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 GJB6O95452 261 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 CHRNA5P30532 468 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 PLA2G4FQ68DD2 849 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 AAGABQ6PD74 315 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 OTOAQ7RTW8 1153 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 DHDDSQ86SQ9 333 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 EPS8L1Q8TE68 723 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 PYDC1Q8WXC3 89 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 GCNAQ96QF7 691 aa17.83■□□□□ 0.45
HMGXB3-201ENST00000502717 SERPINE1P05121 402 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 HUNKP57058 714 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 HABP4Q5JVS0 413 aaKnown RBP17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 ABRAQ8N0Z2 381 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 CLEC4FQ8N1N0 589 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 ASAP3Q8TDY4 903 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 ERVK-5Q9HDB9 667 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 SLCO1B7G3V0H7 640 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 GARTP22102 1010 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 PDK3Q15120 406 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 TCHHL1Q5QJ38 904 aaPredicted RBP17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 C4orf50Q6ZRC1 276 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 RIPOR1Q6ZS17 1223 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 SV2AQ7L0J3 742 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 RMND5BQ96G75 393 aaPredicted RBP17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 KCNH7Q9NS40 1196 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 TMCO1Q9UM00 188 aa17.83■□□□□ 0.44
HMGXB3-201ENST00000502717 TBC1D4O60343 1298 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 FDFT1P37268 417 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 XIAPP98170 497 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 LRRC8BQ6P9F7 803 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 GALNT15Q8N3T1 639 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 EZH1Q92800 747 aaPredicted RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 CASP10Q92851 521 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RMDN2Q96LZ7 410 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 DDX50Q9BQ39 737 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RNF146Q9NTX7 359 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 CLIC5Q9NZA1 410 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 MEI4A8MW99 385 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 OATP04181 439 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 CASP5P51878 434 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 NCKAP1LP55160 1127 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RPL10AP62906 217 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 GCNT1Q02742 428 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 FAAP100Q0VG06 881 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 FAXCQ5TGI0 409 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 SEL1L3Q68CR1 1132 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 TMEM79Q9BSE2 394 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 GSC2O15499 205 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms