RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MAPK7Q13164 816 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 DMP1Q13316 513 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 PPP2R5AQ15172 486 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 MTERF2Q49AM1 385 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 HSF5Q4G112 596 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 MFSD14CQ5VZR4 134 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 PLA2G4FQ68DD2 849 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 MFSD5Q6N075 450 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 HAUS6Q7Z4H7 955 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 FBXO16Q8IX29 292 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 PHACTR4Q8IZ21 702 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 DAW1Q8N136 415 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 SLC16A11Q8NCK7 471 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNF397Q8NF99 534 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 KIAA1524Q8TCG1 905 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 TCP11Q8WWU5 503 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 ATOH1Q92858 354 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 MAML3Q96JK9 1138 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 SPATA33Q96N06 139 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 ERGIC2Q96RQ1 377 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 NTPCRQ9BSD7 190 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 TINF2Q9BSI4 451 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 NAA15Q9BXJ9 866 aaKnown RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 NDST4Q9H3R1 872 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 BCAS3Q9H6U6 928 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 POLD4Q9HCU8 107 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 INTS13Q9NVM9 706 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 ARMCX3Q9UH62 379 aaPredicted RBP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 FRMD4BQ9Y2L6 1034 aa5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGXB4-208ENST00000498325 PHLPP2Q6ZVD8 1323 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 EMSYQ7Z589 1322 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PRR23AA6NEV1 266 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FADS2P1A8MWK0 482 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PROB1E7EW31 1015 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CLIC2O15247 247 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 SLC16A4O15374 487 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ASAP2O43150 1006 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ARHGAP6O43182 974 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 HBP1O60381 514 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LPXNO60711 386 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PPFIA4O75335 1185 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 MAFO75444 373 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ARIH2O95376 493 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 BPNT1O95861 308 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FSHBP01225 129 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 HOXC6P09630 235 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CYBAP13498 195 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PRKCAP17252 672 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PFKLP17858 780 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 NPTX2P47972 431 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 KCNJ6P48051 423 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CASP5P51878 434 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ADAM17P78536 824 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CYP4F8P98187 520 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 RBL2Q08999 1139 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LRMPQ12912 555 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PPIGQ13427 754 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ACVR2BQ13705 512 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CBX2Q14781 532 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 NOLC1Q14978 699 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 EMC2Q15006 297 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ACAP1Q15027 740 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 SYCP1Q15431 976 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 HSDL1Q3SXM5 330 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 BBS9Q3SYG4 887 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LEXMQ3ZCV2 418 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 DUSP28Q4G0W2 176 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ZC2HC1CQ53FD0 456 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FIGNQ5HY92 759 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNF484Q5JVG2 852 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ARMCX5Q6P1M9 558 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LRRC55Q6ZSA7 311 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LSRQ86X29 649 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 TRIM59Q8IWR1 403 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 NPLOC4Q8TAT6 608 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ATP8B4Q8TF62 1192 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 TMEM174Q8WUU8 243 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 CPLX3Q8WVH0 158 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 RMDN1Q96DB5 314 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 EEF2KMTQ96G04 330 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FCRL2Q96LA5 508 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PANX2Q96RD6 677 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FIZ1Q96SL8 496 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 BAG1Q99933 345 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 SH2D3AQ9BRG2 576 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 STRA6Q9BX79 667 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 FGFBP2Q9BYJ0 223 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 EDEM3Q9BZQ6 932 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 DHX33Q9H6R0 707 aaKnown RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 UBE2ZQ9H832 354 aaPredicted RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ZNHIT6Q9NWK9 470 aaKnown RBP5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 ERAP1Q9NZ08 941 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 REV1Q9UBZ9 1251 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 TBX21Q9UL17 535 aa5.74□□□□□ -1.49
HMGXB4-208ENST00000498325 LUC7L2Q9Y383 392 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms