RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TRMT13Q9NUP7 481 aaKnown RBP4.89□□□□□ -1.63
SMC4-227ENST00000497984 TFCP2L1Q9NZI6 479 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 AMFRQ9UKV5 643 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 STXBP5LQ9Y2K9 1186 aa4.89□□□□□ -1.63
SMC4-227ENST00000497984 A0A087WWL8 130 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 THBS4P35443 961 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 SATB1Q01826 763 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 KRT17Q04695 432 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 MEPCEQ7L2J0 689 aaKnown RBP4.88□□□□□ -1.63
SMC4-227ENST00000497984 SIRT6Q8N6T7 355 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 MTFMTQ96DP5 389 aaKnown RBP4.88□□□□□ -1.63
SMC4-227ENST00000497984 MARK4Q96L34 752 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 P2RX7Q99572 595 aaKnown RBP4.88□□□□□ -1.63
SMC4-227ENST00000497984 C17orf80Q9BSJ5 609 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 ARMT1Q9H993 441 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 CPA4Q9UI42 421 aa4.88□□□□□ -1.63
SMC4-227ENST00000497984 LUC7L2Q9Y383 392 aaKnown RBP4.88□□□□□ -1.63
SMC4-227ENST00000497984 GCATO75600 419 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 ABLIM3O94929 683 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 XRCC6P12956 609 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMC4-227ENST00000497984 GKP32189 559 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 ARFIP2P53365 341 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 ATAT1Q5SQI0 421 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 DNAJC5GQ8N7S2 189 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 OSR1Q8TAX0 266 aaPredicted RBP4.87□□□□□ -1.63
SMC4-227ENST00000497984 TMEM171Q8WVE6 324 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 MAP4K1Q92918 833 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 CUL5Q93034 780 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 SIGLEC11Q96RL6 698 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 TCF7L1Q9HCS4 588 aa4.87□□□□□ -1.63
SMC4-227ENST00000497984 MYO1CO00159 1063 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 PMPCBO75439 489 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 OAZ2O95190 189 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 MT-CO3P00414 261 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 APEHP13798 732 aaKnown RBP4.86□□□□□ -1.63
SMC4-227ENST00000497984 THBS3P49746 956 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 RAB1AP62820 205 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 LMAN2Q12907 356 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 SEC23BQ15437 767 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 DEF8Q6ZN54 512 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 LINC01465Q8N7H1 131 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 BPIFB1Q8TDL5 484 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 IGFBPL1Q8WX77 278 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 CTHRC1Q96CG8 243 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 CCDC17Q96LX7 622 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 MAP3K14Q99558 947 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 NUP88Q99567 741 aaPredicted RBP4.86□□□□□ -1.63
SMC4-227ENST00000497984 TRIM54Q9BYV2 358 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 FOXP1Q9H334 677 aaPredicted RBP4.86□□□□□ -1.63
SMC4-227ENST00000497984 STAP2Q9UGK3 403 aa4.86□□□□□ -1.63
SMC4-227ENST00000497984 A0A088AWK7 358 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 CD8B2A6NJW9 211 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 CES2O00748 559 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 TLR2O60603 784 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 PRKAG1P54619 331 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
SMC4-227ENST00000497984 CFHR1Q03591 330 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 MLC1Q15049 377 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 PTCHD3Q3KNS1 767 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 PLA1AQ53H76 456 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 GRAMD1CQ8IYS0 662 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 CHMP4CQ96CF2 233 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 DPH1Q9BZG8 443 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 GBA2Q9HCG7 927 aaPredicted RBP4.85□□□□□ -1.63
SMC4-227ENST00000497984 PIH1D1Q9NWS0 290 aaKnown RBP4.85□□□□□ -1.63
SMC4-227ENST00000497984 LPAR3Q9UBY5 353 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 ZMYM2Q9UBW7 1377 aa4.85□□□□□ -1.63
SMC4-227ENST00000497984 CADPSQ9ULU8 1353 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 PRR23D1E9PI22 279 aaPredicted RBP4.84□□□□□ -1.63
SMC4-227ENST00000497984 CNOT3O75175 753 aaKnown RBP4.84□□□□□ -1.63
SMC4-227ENST00000497984 ALPLP05186 524 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 PRR23D2P0DMB1 279 aaPredicted RBP4.84□□□□□ -1.63
SMC4-227ENST00000497984 NPR1P16066 1061 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 SCP2P22307 547 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 ZNF91Q05481 1191 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 CTBP1Q13363 440 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 FGL2Q14314 439 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
SMC4-227ENST00000497984 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 CERCAMQ5T4B2 595 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 LIX1LQ8IVB5 337 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 KBTBD7Q8WVZ9 684 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 PPP2R3CQ969Q6 453 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 C1GALT1C1Q96EU7 318 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 MS4A7Q9GZW8 240 aaPredicted RBP4.84□□□□□ -1.63
SMC4-227ENST00000497984 SLC12A5Q9H2X9 1139 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 CNNM1Q9NRU3 951 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 TMEM184CQ9NVA4 438 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 HEY2Q9UBP5 337 aa4.84□□□□□ -1.63
SMC4-227ENST00000497984 TOMM40O96008 361 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 CYP19A1P11511 503 aaPredicted RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 PHKG2P15735 406 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 ATF7P17544 494 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms