RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 LEFTY2O00292 366 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 SLC9A3R1O14745 358 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 RPP40O75818 363 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 RTN3O95197 1032 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 KIF20AO95235 890 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 MYL1P05976 194 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 P4HA1P13674 534 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 CMA1P23946 247 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 CASP4P49662 377 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 ATXN1P54253 815 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 STK4Q13043 487 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 NCOA4Q13772 614 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 DDX42Q86XP3 938 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 TMC2Q8TDI7 906 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 CCDC47Q96A33 483 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 ACDQ96AP0 544 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 ZNF518BQ9C0D4 1074 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 DPEP3Q9H4B8 488 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 SEMA4GQ9NTN9 838 aa12.51□□□□□ -0.41
NUDCD3-211ENST00000497978 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 PDXKO00764 312 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 KLRC4O43908 158 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 PFKFB1P16118 471 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 YWHAQP27348 245 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 CLDN10P78369 228 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 KRT85P78386 507 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 SLC7A9P82251 487 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 IFRD2Q12894 506 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 TAF10Q12962 218 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 CSRP2Q16527 193 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 SLC9A9Q8IVB4 645 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 TMEM174Q8WUU8 243 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 OVCA2Q8WZ82 227 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 SPATA32Q96LK8 384 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 B3GNT5Q9BYG0 378 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 GZF1Q9H116 711 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 DMAC2Q9NW81 257 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 FRMD4BQ9Y2L6 1034 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 HELZP42694 1942 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
NUDCD3-211ENST00000497978 RALGAPA1Q6GYQ0 2036 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CLDN5O00501 218 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 AXIN1O15169 862 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CALUO43852 315 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 AKAP3O75969 853 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 C4BPAP04003 597 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 NR3C1P04150 777 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CDH8P55286 799 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 SGSM1Q2NKQ1 1148 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 SCARA5Q6ZMJ2 495 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 PRR23CQ6ZRP0 262 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 SYT13Q7L8C5 426 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 TAF4BQ92750 862 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 FBXO32Q969P5 355 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 HHIPQ96QV1 700 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CPQQ9Y646 472 aa12.49□□□□□ -0.41
NUDCD3-211ENST00000497978 CEP250Q9BV73 2442 aa12.48□□□□□ -0.41
NUDCD3-211ENST00000497978 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-211ENST00000497978 IKBKBO14920 756 aa12.48□□□□□ -0.41
NUDCD3-211ENST00000497978 APBB3O95704 486 aa12.48□□□□□ -0.41
NUDCD3-211ENST00000497978 OLFM2O95897 454 aa12.48□□□□□ -0.41
NUDCD3-211ENST00000497978 HOXC13P31276 330 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms