RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	CRELD2	Q6UXH1	353 aa	Predicted RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	CEP57	Q86XR8	500 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	EFCAB13	Q8IY85	973 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	HACE1	Q8IYU2	909 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	FAM184A	Q8NB25	1140 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	PJA1	Q8NG27	643 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	OR10T2	Q8NGX3	314 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	ACSF2	Q96CM8	615 aa	Predicted RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	CHFR	Q96EP1	664 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	ZSWIM3	Q96MP5	696 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	UROC1	Q96N76	676 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	LRRC3B	Q96PB8	259 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	MRPL4	Q9BYD3	311 aa	Known RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	ZNF334	Q9HCZ1	680 aa	Predicted RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	KMT5A	Q9NQR1	393 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	ANKFY1	Q9P2R3	1169 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	WNT16	Q9UBV4	365 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	FBXO2	Q9UK22	296 aa	Predicted RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	CDH7	Q9ULB5	785 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	NOL7	Q9UMY1	257 aa	Known RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	SSX2IP	Q9Y2D8	614 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	INSL5	Q9Y5Q6	135 aa		6	□□□□□ -1.45
UBE3C-208	ENST00000497368	EP300	Q09472	2414 aa	Predicted RBP	6	□□□□□ -1.45
UBE3C-208	ENST00000497368	PTPRJ	Q12913	1337 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368		A0A0B4J269	797 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PRR19	A6NJB7	356 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	CCDC169	A6NNP5	214 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	LACTBL1	A8MY62	500 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368		K7ERI5	159 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	TOM1L1	O75674	476 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	SOAT2	O75908	522 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	RHO	P08100	348 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	GJA1	P17302	382 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	NMT1	P30419	496 aa	Known RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ADSS	P30520	456 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	GSTT1	P30711	240 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	STARD6	P59095	220 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	CREM	Q03060	361 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ELAVL2	Q12926	359 aa	Known RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	DMP1	Q13316	513 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PABPC1L	Q4VXU2	614 aa	Known RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	RILPL1	Q5EBL4	403 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	SPECC1	Q5M775	1068 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PPM1L	Q5SGD2	360 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	KRT79	Q5XKE5	535 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	TANGO2	Q6ICL3	276 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PAOX	Q6QHF9	649 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	VIT	Q6UXI7	678 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ZPBP2	Q6X784	338 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PDZD3	Q86UT5	571 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	GPBP1	Q86WP2	473 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	SULF2	Q8IWU5	870 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	TCEAL8	Q8IYN2	117 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	STKLD1	Q8NE28	680 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	RAD54L	Q92698	747 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	NELL1	Q92832	810 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ATOH1	Q92858	354 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	DNAJC19	Q96DA6	116 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	BORCS6	Q96GS4	357 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	EPSTI1	Q96J88	318 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	IFT74	Q96LB3	600 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	DRC1	Q96MC2	740 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	PRRX2	Q99811	253 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ADPGK	Q9BRR6	497 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	CCDC94	Q9BW85	323 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	GZF1	Q9H116	711 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	C17orf75	Q9HAS0	396 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	C2orf42	Q9NWW7	574 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	CPSF3	Q9UKF6	684 aa	Known RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	YIPF1	Q9Y548	306 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	NME7	Q9Y5B8	376 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	CLIC4	Q9Y696	253 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368		R4GN57	208 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ASPM	Q8IZT6	3477 aa		5.99	□□□□□ -1.45
UBE3C-208	ENST00000497368	ANO9	A1A5B4	782 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	FRMD3	A2A2Y4	597 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	MTMR11	A4FU01	709 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	ANKRD33B	A6NCL7	494 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	MYMK	A6NI61	221 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	SYN3	O14994	580 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	TMPRSS2	O15393	492 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	HCRT	O43612	131 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	TADA3	O75528	432 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	PRAMEF12	O95522	483 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	F13B	P05160	661 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	ATF2	P15336	505 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	ATF6	P18850	670 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	CD72	P21854	359 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	ADM	P35318	185 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	HOXD13	P35453	343 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	ASPA	P45381	313 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	CD97	P48960	835 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	CDR1	P51861	262 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	GTF2B	Q00403	316 aa		5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	BMS1	Q14692	1282 aa	Known RBP	5.98	□□□□□ -1.45
UBE3C-208	ENST00000497368	SF3A1	Q15459	793 aa	Known RBP	5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms