RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 LSM14BQ9BX40 385 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 PLA2G12BQ9BX93 195 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ELAC1Q9H777 363 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 IL23AQ9NPF7 189 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 RBM12Q9NTZ6 932 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 AASSQ9UDR5 926 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF112Q9UJU3 913 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 SLC30A1Q9Y6M5 507 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 C2CD3Q4AC94 2353 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 FYCO1Q9BQS8 1478 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 NPHP3Q7Z494 1330 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 BRCA1P38398 1863 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 A0A1W2PPH5 198 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 PATE3B3GLJ2 98 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 F8W8V4 182 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ACKR2O00590 384 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 FOXS1O43638 330 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 STC2O76061 302 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DNTTP04053 509 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 THP07101 528 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 GUCY1A2P33402 732 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 STAT1P42224 750 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ITGA8P53708 1063 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ATXN1P54253 815 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ATP8B2P98198 1209 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DSC2Q02487 901 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 FZD5Q13467 585 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 SLC35G1Q2M3R5 365 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ZACNQ401N2 412 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 FBLN7Q53RD9 439 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 KLHDC7AQ5VTJ3 777 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 PLBD1Q6P4A8 553 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DAAM2Q86T65 1068 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 CPOQ8IVL8 374 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 HSCBQ8IWL3 235 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 TRMT2AQ8IZ69 625 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 SHCBP1Q8NEM2 672 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 KLHDC4Q8TBB5 520 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ZNF480Q8WV37 535 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 UCMAQ8WVF2 138 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DPF2Q92785 391 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ATP6V1E2Q96A05 226 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 LTV1Q96GA3 475 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 LMF1Q96S06 567 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 DMRTA2Q96SC8 542 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 MYCBPQ99417 103 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 CDX2Q99626 313 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 SDF4Q9BRK5 362 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 UNKQ9C0B0 810 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 KCNH6Q9H252 994 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 OBP2BQ9NPH6 170 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 GPRC5DQ9NZD1 345 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 LRFN1Q9P244 771 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 STAP2Q9UGK3 403 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 SNX5Q9Y5X3 404 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 ARHGAP5Q13017 1502 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 CEP250Q9BV73 2442 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 SCN11AQ9UI33 1791 aa4.14□□□□□ -1.75
EXOSC3-208ENST00000496910 TRPM7Q96QT4 1865 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 TECPR2O15040 1411 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 HELZ2Q9BYK8 2649 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ERVK-7P63135 1459 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 KIAA1551Q9HCM1 1747 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 COL14A1Q05707 1796 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CCDC154A6NI56 674 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 SMTNL1A8MU46 457 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 LGALS16A8MUM7 142 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 C19orf81C9J6K1 198 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 MASP2O00187 686 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 IPO5O00410 1097 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 NPC1O15118 1278 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 P4HA2O15460 535 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 IRAK2O43187 625 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 DAPK3O43293 454 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PLA2G6O60733 806 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 USO1O60763 962 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PRAMEF4O60810 478 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 DTNBO60941 627 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ITGA10O75578 1167 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 RAD17O75943 681 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 AMY1AP04745 511 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 ITGB3P05106 788 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 HNRNPCP07910 306 aaKnown RBP eCLIP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 MTHFD1P11586 935 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 GSPT1P15170 499 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CRHR1P34998 444 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CASRP41180 1078 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 NPTX2P47972 431 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 PLCB4Q15147 1175 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM110CQ1W6H9 321 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 FAM109BQ6ICB4 259 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 Q6ZSN1 163 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 LIMS2Q7Z4I7 341 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 TAX1BP1Q86VP1 789 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 KRTAP1-3Q8IUG1 177 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 CMTM4Q8IZR5 234 aa4.13□□□□□ -1.75
EXOSC3-208ENST00000496910 FUKQ8N0W3 1084 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms