RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 GPX6P59796 221 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 KRT81Q14533 505 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 FBXO36Q8NEA4 188 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PPTC7Q8NI37 304 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PRCCQ92733 491 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 TRIM33Q9UPN9 1127 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 SIP14410 1827 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 A8MXQ7 604 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PPP1R12AO14974 1030 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 RECQL4O94761 1208 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 HMGCRP04035 888 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 CYP2B6P20813 491 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 HOXA11P31270 313 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 FOXN2P32314 431 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ENPEPQ07075 957 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ARMC3Q5W041 872 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 FAM172AQ8WUF8 416 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PGLYRP2Q96PD5 576 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PNMA3Q9UL41 463 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 MKI67P46013 3256 aaKnown RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 CLDN5O00501 218 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 FAM155BO75949 473 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 F7P08709 466 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 SLC26A2P50443 739 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 CCNA1P78396 465 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 HIF1AQ16665 826 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 PYROXD1Q8WU10 500 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 FLRT1Q9NZU1 646 aa12.88□□□□□ -0.35
PDE6B-212ENST00000496514 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
PDE6B-212ENST00000496514 SPTLC1O15269 473 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 TREHO43280 583 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CYP2C9P11712 490 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 GPD1P21695 349 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 RPA3P35244 121 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 RBP5P82980 135 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 SPDYCQ5MJ68 293 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 C3orf62Q6ZUJ4 267 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 SYDE1Q6ZW31 735 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 KATNBL1Q9H079 304 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 GRID1Q9ULK0 1009 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CLUHO75153 1309 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 A0A0G2JMZ2 1700 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 LRRC37A2A6NM11 1700 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 A0A1B0GUA9 196 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 KCNN4O15554 427 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CDH16O75309 829 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 MYL3P08590 195 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 FGFR1P11362 822 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 SCTRP47872 440 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 PITX1P78337 314 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 ACTN3Q08043 901 aaPredicted RBP12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 LDLRAD1Q5T700 205 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
PDE6B-212ENST00000496514 CELF2O95319 508 aaKnown RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 KRT7P08729 469 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 CA4P22748 312 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 TNFAIP8L3Q5GJ75 292 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 FAM149B1Q96BN6 582 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 RMDN2Q96LZ7 410 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 ROPN1BQ9BZX4 212 aaPredicted RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 ROPN1Q9HAT0 212 aaPredicted RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 NKIRAS1Q9NYS0 192 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 MCF2LO15068 1137 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 MAGEB2O15479 319 aa12.86□□□□□ -0.35
PDE6B-212ENST00000496514 PAPSS1O43252 624 aaPredicted RBP12.86□□□□□ -0.35
PDE6B-212ENST00000496514 UBOX5O94941 541 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms