RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 SEMA4AQ9H3S1 761 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 DMAP1Q9NPF5 467 aaPredicted RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 KRT82Q9NSB4 513 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 FAM49BQ9NUQ9 324 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
THBS3-208ENST00000496332 MAN1B1Q9UKM7 699 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 ARHGAP26Q9UNA1 814 aa12.56□□□□□ -0.4
THBS3-208ENST00000496332 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 PSMA7O14818 248 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 IFNAR2P48551 515 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 SLC5A3P53794 718 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 ZXDBP98169 803 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 LRRC63Q05C16 580 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 USP4Q13107 963 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 STIM1Q13586 685 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 GAS6Q14393 721 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 DCAF17Q5H9S7 520 aaPredicted RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 DGKKQ5KSL6 1271 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 FBXL13Q8NEE6 735 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 ZMIZ2Q8NF64 920 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 FBXO32Q969P5 355 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 DHTKD1Q96HY7 919 aaPredicted RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 SMOQ99835 787 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 NT5C1AQ9BXI3 368 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 PRMT8Q9NR22 394 aaPredicted RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
THBS3-208ENST00000496332 WNT6Q9Y6F9 365 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 F5P12259 2224 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 OBSL1O75147 1896 aa12.55□□□□□ -0.4
THBS3-208ENST00000496332 LEFTY2O00292 366 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CILPO75339 1184 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 BEST1O76090 585 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 OLFM2O95897 454 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
THBS3-208ENST00000496332 LMNAP02545 664 aaKnown RBP12.54□□□□□ -0.4
THBS3-208ENST00000496332 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 TCF3P15923 654 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ADORA2BP29275 332 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CXCL12P48061 93 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CCR3P51677 355 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 SLC7A9P82251 487 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 AMPD2Q01433 879 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CCINQ13939 588 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CBWD6Q4V339 395 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CBWD3Q5JTY5 395 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CBWD5Q5RIA9 395 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 Q6ZS52 159 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CPA6Q8N4T0 437 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CYFIP2Q96F07 1278 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 HNRNPABQ99729 332 aaKnown RBP12.54□□□□□ -0.4
THBS3-208ENST00000496332 LINC00597Q9H2U6 94 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ECT2Q9H8V3 914 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ZSCAN32Q9NX65 697 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 IL37Q9NZH6 218 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 ARMCX3Q9UH62 379 aaPredicted RBP12.54□□□□□ -0.4
THBS3-208ENST00000496332 PCDHGA2Q9Y5H1 932 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CPQQ9Y646 472 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 PTPRDP23468 1912 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
THBS3-208ENST00000496332 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 GREB1Q4ZG55 1949 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 BIN1O00499 593 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
THBS3-208ENST00000496332 BMP6P22004 513 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 GJA4P35212 333 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 PPP1R2P41236 205 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 GALK1P51570 392 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 SATB1Q01826 763 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 GRSF1Q12849 480 aaKnown RBP eCLIP12.53□□□□□ -0.4
THBS3-208ENST00000496332 PPP2R5DQ14738 602 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 EML3Q32P44 896 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 TMEM196Q5HYL7 178 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 KLHL10Q6JEL2 608 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 SYNPOQ8N3V7 929 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 NELL1Q92832 810 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 TATDN2Q93075 761 aa12.53□□□□□ -0.4
THBS3-208ENST00000496332 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms