RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 SNX30Q5VWJ9 437 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 ZNF852Q6ZMS4 543 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 UBR7Q8N806 425 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 SLC4A11Q8NBS3 891 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 NELL2Q99435 816 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 NT5C1AQ9BXI3 368 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 RNF38Q9H0F5 515 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
TRIM59-207ENST00000496222 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
TRIM59-207ENST00000496222 GKN1Q9NS71 199 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 CISHQ9NSE2 258 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 GTSE1Q9NYZ3 720 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 MYH10P35580 1976 aa13.07□□□□□ -0.32
TRIM59-207ENST00000496222 TRAV19A0A0A6YYK7 116 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 MAN2B1O00754 1011 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 PFKLP17858 780 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 HDCP19113 662 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 RPS9P46781 194 aaKnown RBP13.06□□□□□ -0.32
TRIM59-207ENST00000496222 PPP3CCP48454 512 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 SLC5A3P53794 718 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 RAD23BP54727 409 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 SLC7A9P82251 487 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 USP4Q13107 963 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 TRIM68Q6AZZ1 485 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 TRIM59Q8IWR1 403 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 FAM3CQ92520 227 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 MED10Q9BTT4 135 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 CLSTN2Q9H4D0 955 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
TRIM59-207ENST00000496222 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 FAM86C1Q9NVL1 165 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 EHD2Q9NZN4 543 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 TRPM5Q9NZQ8 1165 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 ARHGAP26Q9UNA1 814 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 ATP8B3O60423 1300 aa13.06□□□□□ -0.32
TRIM59-207ENST00000496222 ZFHX2Q9C0A1 2572 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 PROB1E7EW31 1015 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 SPECC1L-ADORA2AF8WAN1 911 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CLSTN1O94985 981 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 RTN3O95197 1032 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CHRNB1P11230 501 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 RFX1P22670 979 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 YWHAQP27348 245 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 ADORA2BP29275 332 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CTHP32929 405 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 PPP1R26Q5T8A7 1209 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 C1orf210Q8IVY1 113 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CCDC150Q8NCX0 1101 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 TTC8Q8TAM2 541 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CSGALNACT1Q8TDX6 532 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 SRRTQ9BXP5 876 aaKnown RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 C8orf33Q9H7E9 229 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
TRIM59-207ENST00000496222 RWDD2AQ9UIY3 292 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 FANCMQ8IYD8 2048 aa13.05□□□□□ -0.32
TRIM59-207ENST00000496222 CKMP06732 381 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ARSAP15289 507 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ACO1P21399 889 aaKnown RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 NBL1P41271 181 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 MAGEA9P43362 315 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 CUL2Q13617 745 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 RUNX3Q13761 415 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 GAS6Q14393 721 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 MTF1Q14872 753 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 RALGPS2Q86X27 583 aaPredicted RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 TTC39CQ8N584 583 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 OSCP1Q8WVF1 389 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 MSANTD3Q96H12 275 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 IRF2BPLQ9H1B7 796 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 PNPLA8Q9NP80 782 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms