RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 COL26A1Q96A83 441 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 DUSP9Q99956 384 aaKnown RBP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 RNF38Q9H0F5 515 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 TRPM5Q9NZQ8 1165 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL1A1-209ENST00000495677 TBC1D14Q9P2M4 693 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 DKK4Q9UBT3 224 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 AGAP1Q9UPQ3 857 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 APC2O95996 2303 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 KNTC1P50748 2209 aa14.39□□□□□ -0.11
COL1A1-209ENST00000495677 CABIN1Q9Y6J0 2220 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ZNF840PA6NDX5 716 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ACAT1P24752 427 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ADSSP30520 456 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 POLR2BP30876 1174 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 RPL6Q02878 288 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 RESTQ13127 1097 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 MAPRE1Q15691 268 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 COL28A1Q2UY09 1125 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 DENND5BQ6ZUT9 1274 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ZNF720Q7Z2F6 126 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 TRMT11Q7Z4G4 463 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 SCN4BQ8IWT1 228 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 OTUB2Q96DC9 234 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 GTPBP2Q9BX10 602 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 CCDC86Q9H6F5 360 aaKnown RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 ARHGEF4Q9NR80 690 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 KIAA1522Q9P206 1035 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 MAGEC2Q9UBF1 373 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-209ENST00000495677 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
COL1A1-209ENST00000495677 CELSR3Q9NYQ7 3312 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 TCRBV21S2A2A0A5A6 115 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 VWA3AA6NCI4 1184 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 TISP43B9A030 160 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ZNF217O75362 1048 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ADH1CP00326 375 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 OAS1P00973 400 aaKnown RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ITGB3P05106 788 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 NOP14P78316 857 aaKnown RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 SOWAHAQ2M3V2 549 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 C19orf48Q6RUI8 117 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 C12orf40Q86WS4 652 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ETFBKMTQ8IXQ9 262 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 PGBD3Q8N328 593 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 POMGNT1Q8WZA1 660 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 CALML4Q96GE6 196 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ZNF419Q96HQ0 510 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 STRA6Q9BX79 667 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 FAM124BQ9H5Z6 455 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 FSCN3Q9NQT6 498 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ITGA11Q9UKX5 1188 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
COL1A1-209ENST00000495677 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 ATXN2Q99700 1313 aaKnown RBP14.37□□□□□ -0.11
COL1A1-209ENST00000495677 IGHV1OR15-9A0A0B4J2B8 117 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 E2F8A0AVK6 867 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 SH3BP5O60239 455 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
COL1A1-209ENST00000495677 PPP1R37O75864 691 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 FTH1P19P0C7X4 201 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 ADH5P11766 374 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 GABRG2P18507 467 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
COL1A1-209ENST00000495677 GAD2Q05329 585 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 SLC41A1Q8IVJ1 513 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 BRSK2Q8IWQ3 736 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 CSGALNACT2Q8N6G5 542 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 ZDHHC5Q9C0B5 715 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 APOBEC2Q9Y235 224 aaKnown RBP14.36□□□□□ -0.11
COL1A1-209ENST00000495677 PCDHB9Q9Y5E1 797 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 CPQQ9Y646 472 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 KNL1Q8NG31 2342 aa14.36□□□□□ -0.11
COL1A1-209ENST00000495677 TRIM66O15016 1216 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 FAM163BP0C2L3 166 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 BDNFP23560 247 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 GRIK1P39086 918 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 WNT7BP56706 349 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 USP46P62068 366 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 RBP5P82980 135 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 CCDC142Q17RM4 750 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 ZNF513Q8N8E2 541 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-209ENST00000495677 RAD54LQ92698 747 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 C8orf48Q96LL4 319 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms