RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
TMEM53-209ENST00000495630 RLN3Q8WXF3 142 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 GATA6Q92908 595 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 FAM84AQ96KN4 292 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 FNBP1Q96RU3 617 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 SCNM1Q9BWG6 230 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 CPQQ9Y646 472 aa18.73■□□□□ 0.59
TMEM53-209ENST00000495630 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 FRMD3A2A2Y4 597 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 SGK1O00141 431 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 CHRM1P11229 460 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 TIE1P35590 1138 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 GNL1P36915 607 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 TXLNAP40222 546 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 KIR2DL1P43626 348 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 EMC10Q5UCC4 262 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 TDRD10Q5VZ19 366 aaKnown RBP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 SLC23A3Q6PIS1 610 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 TMEFF1Q8IYR6 380 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 DEFB124Q8NES8 71 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 OR5B17Q8NGF7 314 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 PCED1BQ96HM7 432 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 MMS19Q96T76 1030 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 PANK4Q9NVE7 773 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 TBC1D14Q9P2M4 693 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-209ENST00000495630 CLIC4Q9Y696 253 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 THADAQ6YHU6 1953 aa18.72■□□□□ 0.59
TMEM53-209ENST00000495630 UPK3BL1B0FP48 263 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.71■□□□□ 0.59
TMEM53-209ENST00000495630 UPK3BL2E5RIL1 263 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 PRPF6O94906 941 aaKnown RBP18.71■□□□□ 0.59
TMEM53-209ENST00000495630 ADH1CP00326 375 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 ABL1P00519 1130 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 OAS1P00973 400 aaKnown RBP18.71■□□□□ 0.59
TMEM53-209ENST00000495630 TAF10Q12962 218 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 RESTQ13127 1097 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 CCDC73Q6ZRK6 1079 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 SFTPA1Q8IWL2 248 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 KCNV2Q8TDN2 545 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 KIAA1586Q9HCI6 787 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 ARHGEF4Q9NR80 690 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 TMEM74BQ9NUR3 256 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 SMPD4Q9NXE4 827 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 CFAP97Q9P2B7 532 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 MBD1Q9UIS9 605 aaPredicted RBP18.71■□□□□ 0.59
TMEM53-209ENST00000495630 CIZ1Q9ULV3 898 aaPredicted RBP18.71■□□□□ 0.59
TMEM53-209ENST00000495630 NUP205Q92621 2012 aa18.71■□□□□ 0.59
TMEM53-209ENST00000495630 E2F8A0AVK6 867 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 F8VP50 259 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 TACC1O75410 805 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 CD2BP2O95400 341 aaKnown RBP18.7■□□□□ 0.58
TMEM53-209ENST00000495630 ENGP17813 658 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 HOXD12P35452 270 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 PTGER3P43115 390 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 MESP2Q0VG99 397 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 MAP7D1Q3KQU3 841 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 HS2ST1Q7LGA3 356 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 CEP76Q8TAP6 659 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 OTUB2Q96DC9 234 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 SLITRK1Q96PX8 696 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 BCCIPQ9P287 314 aaKnown RBP eCLIP18.7■□□□□ 0.58
TMEM53-209ENST00000495630 PILRBQ9UKJ0 227 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 NEUROG3Q9Y4Z2 214 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 ANAPC1Q9H1A4 1944 aa18.7■□□□□ 0.58
TMEM53-209ENST00000495630 SRRM3A6NNA2 597 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-209ENST00000495630 ADAM23O75077 832 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 MBL2P11226 248 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-209ENST00000495630 ADH5P11766 374 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PTPN1P18031 435 aaKnown RBP18.69■□□□□ 0.58
TMEM53-209ENST00000495630 MAPK8P45983 427 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 SEMA3BQ13214 749 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PREPLQ4J6C6 727 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-209ENST00000495630 MDH1BQ5I0G3 518 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-209ENST00000495630 LYSMD4Q5XG99 296 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 NUDT18Q6ZVK8 323 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 TRAPPC11Q7Z392 1133 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PIP4P1Q86T03 277 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 WDR49Q8IV35 697 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 CCDC65Q8IXS2 484 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PGBD3Q8N328 593 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 FRMD1Q8N878 549 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 HMGB4Q8WW32 186 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 FGFBP2Q9BYJ0 223 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 SLC6A14Q9UN76 642 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 PTPRJQ12913 1337 aa18.69■□□□□ 0.58
TMEM53-209ENST00000495630 ZZEF1O43149 2961 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 CST3P01034 146 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-209ENST00000495630 RDXP35241 583 aaKnown RBP18.68■□□□□ 0.58
TMEM53-209ENST00000495630 GAD2Q05329 585 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 DUOXA1Q1HG43 343 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 LY6G5CQ5SRR4 150 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 SLC36A4Q6YBV0 504 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 ARMCX6Q7L4S7 300 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms