RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 ZDHHC17Q8IUH5 632 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 TACO1Q9BSH4 297 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 OSBPL8Q9BZF1 889 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 CYLDQ9NQC7 956 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 FAM114A2Q9NRY5 505 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 HOMER3Q9NSC5 361 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 MIOSQ9NXC5 875 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 KBTBD13C9JR72 458 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 GABRDO14764 452 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 COILP38432 576 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 SATB1Q01826 763 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 KLF1Q13351 362 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 TRAF7Q6Q0C0 670 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 JAMLQ86YT9 394 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 TMEM86AQ8N2M4 240 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 ERP44Q9BS26 406 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC40A1Q9NP59 571 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 GOLGA6L7A0A1B0GV03 622 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 C5orf60A6NFR6 353 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 ARVCFO00192 962 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 HCRTO43612 131 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 KIF1CO43896 1103 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 LRCH4O75427 683 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 RALAP11233 206 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 TCF4P15884 667 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 GJC1P36383 396 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 PTGIRP43119 386 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 CLCNKBP51801 687 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 HADHQ16836 314 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 OR6B2Q6IFH4 312 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 FAM183BPQ6ZVS7 135 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 B3GALNT2Q8NCR0 500 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 SLCO2A1Q92959 643 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 SENP8Q96LD8 212 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 FRMPD3Q5JV73 1810 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 KRT7P08729 469 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 PTPN7P35236 360 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 RPL34P49207 117 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 ZNF143P52747 638 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 DRG2P55039 364 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 GRIK3Q13003 919 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 DUPD1Q68J44 220 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 TTC27Q6P3X3 843 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 OSTM1Q86WC4 334 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 EGFL6Q8IUX8 553 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 EMC1Q8N766 993 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 UBLCP1Q8WVY7 318 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 CD248Q9HCU0 757 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 TRIM17Q9Y577 477 aa19.42■□□□□ 0.7
TSPAN4-212ENST00000494815 KRT1P04264 644 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC130P13994 396 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 PAX3P23760 479 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 RDXP35241 583 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 RGS7P49802 495 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC25A11Q02978 314 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 UPP1Q16831 310 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 WSCD1Q658N2 575 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 OLFML1Q6UWY5 402 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 ZNF598Q86UK7 904 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 ECHDC2Q86YB7 292 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 RNF169Q8NCN4 708 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC114Q96M63 670 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 SLITRK1Q96PX8 696 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 HNRNPABQ99729 332 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 CNPY3Q9BT09 278 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 ASNSD1Q9NWL6 643 aa19.41■□□□□ 0.7
TSPAN4-212ENST00000494815 C2CD4BA6NLJ0 364 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 INPPL1O15357 1258 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 DAPK3O43293 454 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 RNF8O76064 485 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 LHX1P48742 406 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 HTRA3P83110 453 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 QPCTQ16769 361 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ODF2Q5BJF6 829 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC105Q8IYK2 499 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ARFGAP1Q8N6T3 406 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC2A14Q8TDB8 520 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 HERPUD2Q9BSE4 406 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 TRIM51Q9BSJ1 452 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 GPD1P21695 349 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ADORA2BP29275 332 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 PCK1P35558 622 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 FLT3P36888 993 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 SCNN1AP37088 669 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ACADSBP45954 432 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 CDR1P51861 262 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC6A3Q01959 620 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ATP13A4Q4VNC1 1196 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 ZFYVE27Q5T4F4 411 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 TMC3Q7Z5M5 1100 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 SPATA18Q8TC71 538 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 RNF25Q96BH1 459 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 SEC16BQ96JE7 1060 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 HSFY1Q96LI6 401 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 LPIN3Q9BQK8 851 aa19.4■□□□□ 0.7
TSPAN4-212ENST00000494815 GBP1P32455 592 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 MBTPS1Q14703 1052 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 LLGL1Q15334 1064 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms