RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMEM30AQ9NV96 361 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 DACH1Q9UI36 760 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 CCL26Q9Y258 94 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 C2orf78A6NCI8 922 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 PMM2O15305 246 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 SLC8A3P57103 927 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 CUL2Q13617 745 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 PDGFRLQ15198 375 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 ANGPT1Q15389 498 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 ITPRIPL2Q3MIP1 535 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 ZNF394Q53GI3 561 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 RALGPS2Q86X27 583 aaPredicted RBP18.68■□□□□ 0.58
HDAC4-211ENST00000494800 EXOC4Q96A65 974 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 TMEM176AQ96HP8 235 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
HDAC4-211ENST00000494800 TWNKQ96RR1 684 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 CYP2S1Q96SQ9 504 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 GKN1Q9NS71 199 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 GCNT4Q9P109 453 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 NDRG2Q9UN36 371 aaKnown RBP18.68■□□□□ 0.58
HDAC4-211ENST00000494800 ARHGAP26Q9UNA1 814 aa18.68■□□□□ 0.58
HDAC4-211ENST00000494800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.68■□□□□ 0.58
HDAC4-211ENST00000494800 LRRN2O75325 713 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 TARSP26639 723 aaKnown RBP18.67■□□□□ 0.58
HDAC4-211ENST00000494800 RPS9P46781 194 aaKnown RBP18.67■□□□□ 0.58
HDAC4-211ENST00000494800 MARSP56192 900 aaKnown RBP18.67■□□□□ 0.58
HDAC4-211ENST00000494800 MTF1Q14872 753 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 TPD52L1Q16890 204 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-211ENST00000494800 WHAMMQ8TF30 809 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 TATDN2Q93075 761 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 SMOQ99835 787 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 PNPLA8Q9NP80 782 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 GTSE1Q9NYZ3 720 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 DLGAP2Q9P1A6 1054 aa18.67■□□□□ 0.58
HDAC4-211ENST00000494800 SPECC1L-ADORA2AF8WAN1 911 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 TNFRSF10BO14763 440 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 AFPP02771 609 aaKnown RBP18.66■□□□□ 0.58
HDAC4-211ENST00000494800 TCF3P15923 654 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 IFNAR2P48551 515 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 RUNX3Q13761 415 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 LRRC32Q14392 662 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 DDX42Q86XP3 938 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDAC4-211ENST00000494800 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 C1orf210Q8IVY1 113 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 TRIM59Q8IWR1 403 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 SCAMP5Q8TAC9 235 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 SH3RF2Q8TEC5 729 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 CLDN23Q96B33 292 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 SLC22A12Q96S37 553 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 ARID3AQ99856 593 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 FAM83CQ9BQN1 747 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 IER2Q9BTL4 223 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 NACA2Q9H009 215 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 SPATA6Q9NWH7 488 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-211ENST00000494800 DUS2Q9NX74 493 aaKnown RBP18.66■□□□□ 0.58
HDAC4-211ENST00000494800 MTF2Q9Y483 593 aaPredicted RBP18.66■□□□□ 0.58
HDAC4-211ENST00000494800 PTPRDP23468 1912 aa18.66■□□□□ 0.58
HDAC4-211ENST00000494800 CTHP32929 405 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 SLC7A9P82251 487 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 TNK2Q07912 1038 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 LRMPQ12912 555 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 USP4Q13107 963 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 ZNF77Q15935 545 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 HECTD3Q5T447 861 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 PPP1R26Q5T8A7 1209 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-211ENST00000494800 CLEC20AQ6ZU45 233 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 CPA6Q8N4T0 437 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 ZMIZ2Q8NF64 920 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 TTC8Q8TAM2 541 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 OSCP1Q8WVF1 389 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 ATP2A3Q93084 1043 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 JAKMIP2Q96AA8 810 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 DUSP16Q9BY84 665 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 EBF3Q9H4W6 596 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 TLR8Q9NR97 1041 aaKnown RBP18.65■□□□□ 0.58
HDAC4-211ENST00000494800 IL37Q9NZH6 218 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 CHORDC1Q9UHD1 332 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-211ENST00000494800 WDFY4Q6ZS81 3184 aa18.65■□□□□ 0.58
HDAC4-211ENST00000494800 FAM92AA1XBS5 289 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 LAMTOR5O43504 91 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 BEST1O76090 585 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 OAS1P00973 400 aaKnown RBP18.64■□□□□ 0.57
HDAC4-211ENST00000494800 MBL2P11226 248 aaPredicted RBP18.64■□□□□ 0.57
HDAC4-211ENST00000494800 TUBP50607 506 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 RAD23BP54727 409 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 NR1H3Q13133 447 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 PPP2R5DQ14738 602 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 SNX30Q5VWJ9 437 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 KIAA1958Q8N8K9 716 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 SLC4A11Q8NBS3 891 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 LMBRD1Q9NUN5 540 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 HESX1Q9UBX0 185 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 KIAA1257Q9ULG3 409 aa18.64■□□□□ 0.57
HDAC4-211ENST00000494800 MUC6Q6W4X9 2439 aa18.63■□□□□ 0.57
HDAC4-211ENST00000494800 LEFTY2O00292 366 aa18.63■□□□□ 0.57
HDAC4-211ENST00000494800 SLC9A3R1O14745 358 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-211ENST00000494800 OLFM2O95897 454 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms