RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 B3GALNT2Q8NCR0 500 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 C3orf58Q8NDZ4 430 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 SLC2A14Q8TDB8 520 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 CLEC4CQ8WTT0 213 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 C11orf84Q9BUA3 381 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 CDC42EP4Q9H3Q1 356 aaKnown RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 PCSK1NQ9UHG2 260 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 USP18Q9UMW8 372 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
CLCN6-208ENST00000494028 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-208ENST00000494028 DNALI1O14645 258 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 GABRDO14764 452 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 GPR182O15218 404 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 DAB1O75553 588 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CAPN15O75808 1086 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ENDOD1O94919 500 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 SHBGP04278 402 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PDGFRBP09619 1106 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PDGFRAP16234 1089 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PECAM1P16284 738 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 MAP2K2P36507 400 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PTPN9P43378 593 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 AFF1P51825 1210 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 EIF3BP55884 814 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 DYNLT1P63172 113 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 OTUD4Q01804 1114 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CAV1Q03135 178 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ADCY1Q08828 1119 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CDO1Q16878 200 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 WSCD1Q658N2 575 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 DENND2CQ68D51 928 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ZNF771Q7L3S4 317 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CCDC89Q8N998 374 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PCSK9Q8NBP7 692 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CMASQ8NFW8 434 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 TEKT4Q8WW24 435 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 HSPH1Q92598 858 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 SNRNP25Q9BV90 132 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 B3GNT5Q9BYG0 378 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 FRMD8P1Q9BZ68 369 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PCDH9Q9HC56 1237 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 TRMT13Q9NUP7 481 aaKnown RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 MIOSQ9NXC5 875 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 FEZ2Q9UHY8 353 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-208ENST00000494028 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
CLCN6-208ENST00000494028 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CASTOR2A6NHX0 329 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 GOLGA6L10A6NI86 522 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CYB561D2O14569 222 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 RIPK2O43353 540 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CST8O60676 142 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CAND2O75155 1236 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ATP2C2O75185 946 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CABYRO75952 493 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ITGAVP06756 1048 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 FAM163BP0C2L3 166 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 MYZAPP0CAP1 466 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 RARGP13631 454 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 TFE3P19532 575 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ITIH2P19823 946 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 NR1D1P20393 614 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 SDC4P31431 198 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 GNL1P36915 607 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ACADSBP45954 432 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ACLYP53396 1101 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CDH6P55285 790 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 HDAC4P56524 1084 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 LMNB2Q03252 620 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 ITGA7Q13683 1181 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 DPYSL3Q14195 570 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 SLMAPQ14BN4 828 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 KRT71Q3SY84 523 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 MDH1BQ5I0G3 518 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 KCTD16Q68DU8 428 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 FAM35AQ86V20 835 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 HOOK3Q86VS8 718 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 RFX6Q8HWS3 928 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms