RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 SEPT7Q16181 437 aaKnown RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 DGKDQ16760 1214 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 IQSEC1Q6DN90 963 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 DARS2Q6PI48 645 aaKnown RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 ARCQ7LC44 396 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 KIAA0319LQ8IZA0 1049 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 FUKQ8N0W3 1084 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 EMC1Q8N766 993 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 DENND1AQ8TEH3 1009 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 RXFP2Q8WXD0 754 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 HSPH1Q92598 858 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 APBB2Q92870 758 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 ACSF2Q96CM8 615 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 KIF12Q96FN5 646 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF668Q96K58 619 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 CYTH2Q99418 400 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 GCOM2Q9BZD3 368 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 RXFP1Q9HBX9 757 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 SLC5A4Q9NY91 659 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 MORF4L1Q9UBU8 362 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 PCSK1NQ9UHG2 260 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 IKBKGQ9Y6K9 419 aa10.09□□□□□ -0.79
NPHP3-209ENST00000493732 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
NPHP3-209ENST00000493732 IQANK1A0A1B0GTG1 560 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 MDM4O15151 490 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 TM9SF1O15321 606 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF189O75820 626 aaPredicted RBP10.08□□□□□ -0.8
NPHP3-209ENST00000493732 VTNP04004 478 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 GSTA2P09210 222 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CREB1P16220 341 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CA4P22748 312 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 AXLP30530 894 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 SDC4P31431 198 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 EPHX2P34913 555 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 MSH2P43246 934 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 GTF2A2P52657 109 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 MPP2Q14168 576 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 GRIK4Q16099 956 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 SNCBQ16143 134 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 PDK4Q16654 411 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 DUSP28Q4G0W2 176 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 HHATQ5VTY9 493 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CYB5D1Q6P9G0 228 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 SLC27A1Q6PCB7 646 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 DLK2Q6UY11 383 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 C3orf62Q6ZUJ4 267 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 TMEM110Q86TL2 294 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 PARP9Q8IXQ6 854 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CCDC63Q8NA47 563 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 GDAP1Q8TB36 358 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CPB2Q96IY4 423 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 RNF157Q96PX1 679 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 R3HDMLQ9H3Y0 253 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 GBA2Q9HCG7 927 aaPredicted RBP10.08□□□□□ -0.8
NPHP3-209ENST00000493732 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 XPO7Q9UIA9 1087 aaKnown RBP10.08□□□□□ -0.8
NPHP3-209ENST00000493732 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
NPHP3-209ENST00000493732 CD4P01730 458 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 TAC1P20366 129 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 GCAP28676 217 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 SLC8A1P32418 973 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 PNPLA4P41247 253 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 SLC6A3Q01959 620 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 SPDYAQ5MJ70 313 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 TMEM63BQ5T3F8 832 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ARHGAP17Q68EM7 881 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 NOTUMQ6P988 496 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 MOB2Q70IA6 237 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 DPP9Q86TI2 863 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 FAM71DQ8N9W8 422 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 UBA3Q8TBC4 463 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 FBF1Q8TES7 1133 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 LRRC39Q96DD0 335 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 RTP4Q96DX8 246 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF670Q9BS34 389 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 DHRS4Q9BTZ2 278 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 SPON1Q9HCB6 807 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 BCLAF3A2AJT9 711 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 E5RJQ4 531 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 H7C0C1 242 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 APOL1O14791 398 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 DCTN3O75935 186 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 PTPN9P43378 593 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ACADSBP45954 432 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ATP5OP48047 213 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 BASP1P80723 227 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 BNIP1Q12981 228 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 RIPK1Q13546 671 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms