RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
SNX17-208ENST00000493711 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 F8VP50 259 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 RFXAPO00287 272 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX17-208ENST00000493711 XYLBO75191 536 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 RTN2O75298 545 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 ZMYND10O75800 440 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 VNN2O95498 520 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 CALCAP01258 141 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 LRG1P02750 347 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 CALB1P05937 261 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 CSH1P0DML2 217 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 CSH2P0DML3 217 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 MYBL1P10243 752 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 UNGP13051 313 aaPredicted RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 RPL34P49207 117 aaKnown RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 KIF11P52732 1056 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 NOMO3P69849 1222 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 KRT83P78385 493 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 TAF12Q16514 161 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 PPM1LQ5SGD2 360 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 TMEM110Q86TL2 294 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 SCML4Q8N228 414 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 PPP1R13BQ96KQ4 1090 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 CHP1Q99653 195 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 WDR35Q9P2L0 1181 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 YIPF1Q9Y548 306 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
SNX17-208ENST00000493711 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
SNX17-208ENST00000493711 CSPG5O95196 566 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 NDUFA10O95299 355 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 LCA5LO95447 670 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 SEC24AO95486 1093 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 FGF19O95750 216 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 C8AP07357 584 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
SNX17-208ENST00000493711 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 PDCLQ13371 301 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 CCDC122Q5T0U0 273 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 DENND5BQ6ZUT9 1274 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 ADGRD2Q7Z7M1 963 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
SNX17-208ENST00000493711 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 NUP93Q8N1F7 819 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
SNX17-208ENST00000493711 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
SNX17-208ENST00000493711 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 PCDHB18PQ96TA0 734 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 RHOBTB2Q9BYZ6 727 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 ISCUQ9H1K1 167 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 UXTQ9UBK9 157 aaPredicted RBP13.1□□□□□ -0.31
SNX17-208ENST00000493711 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 MTCH2Q9Y6C9 303 aa13.1□□□□□ -0.31
SNX17-208ENST00000493711 A0A087X0T9 212 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 PER2O15055 1255 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 PAPLNO95428 1278 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 FTLP02792 175 aaPredicted RBP13.09□□□□□ -0.31
SNX17-208ENST00000493711 CFHP08603 1231 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 FAM228BP0C875 321 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
SNX17-208ENST00000493711 IGFBP4P22692 258 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 MMP8P22894 467 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 SCNN1AP37088 669 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 GABRB2P47870 512 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 PPP3CCP48454 512 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
SNX17-208ENST00000493711 DDR2Q16832 855 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 PMF1Q6P1K2 205 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ARHGAP18Q8N392 663 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 LEMD2Q8NC56 503 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 PDZD8Q8NEN9 1154 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ZMIZ2Q8NF64 920 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 CPA5Q8WXQ8 436 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 TTC28Q96AY4 2481 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms