RNA–Protein interactions for RNA: ENST00000493698.1

TFIP11-215, Transcript of tuftelin interacting protein 11, human

TSL 3

Gene TFIP11, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFIP11-215	ENST00000493698	ATP1A3	P13637	1013 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	CCDC130	P13994	396 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ATF6	P18850	670 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ACO1	P21399	889 aa	Known RBP	11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	YWHAQ	P27348	245 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	GABRR2	P28476	465 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ADORA2B	P29275	332 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	KRT9	P35527	623 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ACADSB	P45954	432 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ZNF132	P52740	706 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	LCLAT1	Q6UWP7	414 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	SIX6OS1	Q8N1H7	587 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	WHAMM	Q8TF30	809 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	KREMEN1	Q96MU8	473 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	ZNF518B	Q9C0D4	1074 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	HSD3B7	Q9H2F3	369 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	SLITRK6	Q9H5Y7	841 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	LRRC4	Q9HBW1	653 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	TLR8	Q9NR97	1041 aa	Known RBP	11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	TMEM51	Q9NW97	253 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	TRPM5	Q9NZQ8	1165 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	EPS15L1	Q9UBC2	864 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	HMGXB4	Q9UGU5	601 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	TSPAN16	Q9UKR8	245 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	MYO16	Q9Y6X6	1858 aa		11.14	□□□□□ -0.63
TFIP11-215	ENST00000493698	GREB1	Q4ZG55	1949 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	ITIH6	Q6UXX5	1313 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698		F8VZ95	297 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698		M0QYV0	167 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698		O00370	1275 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	FBXO21	O94952	628 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	VNN2	O95498	520 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	IL9	P15248	144 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	WEE1	P30291	646 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	SSTR3	P32745	418 aa	Predicted RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	TUB	P50607	506 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	SLC5A3	P53794	718 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	MAP3K7CL	P57077	242 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	POLR2F	P61218	127 aa	Known RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	ZP2	Q05996	745 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	GOLGA8F	Q08AF8	430 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	GOLGA8DP	Q0D2H9	430 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	DRAP1	Q14919	205 aa	Predicted RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	DDR2	Q16832	855 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	GOLGA7B	Q2TAP0	167 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	SCARA3	Q6AZY7	606 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	TRIM72	Q6ZMU5	477 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	CLEC20A	Q6ZU45	233 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	FAM71A	Q8IYT1	594 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	KIAA1958	Q8N8K9	716 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	C12orf29	Q8N999	325 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	IPO4	Q8TEX9	1081 aa	Known RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	GIPC2	Q8TF65	315 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	FBXO32	Q969P5	355 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	HSFY1	Q96LI6	401 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	TWNK	Q96RR1	684 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	UHRF1	Q96T88	793 aa	Predicted RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	CRISPLD1	Q9H336	500 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	ATXN3L	Q9H3M9	355 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	SIX2	Q9NPC8	291 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	PRDM6	Q9NQX0	595 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	DNMT3B	Q9UBC3	853 aa	Known RBP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	SIK3	Q9Y2K2	1263 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	DENND4C	Q5VZ89	1909 aa		11.13	□□□□□ -0.63
TFIP11-215	ENST00000493698	ZNF638	Q14966	1978 aa	Known RBP	11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	TRAV19	A0A0A6YYK7	116 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	GOLGA6L6	A8MZA4	724 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	CLDN5	O00501	218 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	HCRT	O43612	131 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	LSM8	O95777	96 aa	Known RBP	11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	BMP1	P13497	986 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	FER	P16591	822 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	SOX5	P35711	763 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	AVPR1A	P37288	418 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	PLA2G4A	P47712	749 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	KCNQ1	P51787	676 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	KCNMA1	Q12791	1236 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	ORC1	Q13415	861 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	NR1I3	Q14994	352 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	PRSS36	Q5K4E3	855 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	APTX	Q7Z2E3	356 aa	Known RBP	11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	VPS36	Q86VN1	386 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	TMC8	Q8IU68	726 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	TTC9B	Q8N6N2	239 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	TMEM35B	Q8NCS4	154 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	ADAMTS19	Q8TE59	1207 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	STK32A	Q8WU08	396 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	DEPDC1B	Q8WUY9	529 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	KCTD13	Q8WZ19	329 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	FGF13	Q92913	245 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	RPGRIP1	Q96KN7	1286 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	LPIN3	Q9BQK8	851 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	NAA15	Q9BXJ9	866 aa	Known RBP	11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	NACA2	Q9H009	215 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	GAN	Q9H2C0	597 aa		11.12	□□□□□ -0.63
TFIP11-215	ENST00000493698	TASP1	Q9H6P5	420 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms