RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 C8orf48Q96LL4 319 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 SLITRK1Q96PX8 696 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 C7orf25Q9BPX7 421 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 ELOVL4Q9GZR5 314 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 RNF38Q9H0F5 515 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 BLZF1Q9H2G9 400 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 DPEP3Q9H4B8 488 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 MAGEF1Q9HAY2 307 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 NME7Q9Y5B8 376 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 USP24Q9UPU5 2620 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 WDFY3Q8IZQ1 3526 aa10.94□□□□□ -0.66
NUDCD3-210ENST00000493613 PI4KAP42356 2102 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 CNOT1A5YKK6 2376 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 A8MXQ7 604 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 K7EQS6 105 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 DCLK1O15075 740 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 RHOBTB1O94844 696 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 OLFM2O95897 454 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 CYP17A1P05093 508 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 HSP90AA1P07900 732 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 FAM163BP0C2L3 166 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 GBP1P32455 592 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 ME1P48163 572 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 MYL6P60660 151 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 SLC7A9P82251 487 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 CREB5Q02930 508 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 EHHADHQ08426 723 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TAF10Q12962 218 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TRPC3Q13507 836 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 GAB4Q2WGN9 574 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TDRD10Q5VZ19 366 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 UNC13DQ70J99 1090 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 ADGRG2Q8IZP9 1017 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 B3GALNT2Q8NCR0 500 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TSTD1Q8NFU3 115 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 USP33Q8TEY7 942 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 ZNF516Q92618 1163 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TPSD1Q9BZJ3 242 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 SLC39A2Q9NP94 309 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TMEM30AQ9NV96 361 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 SMPD4Q9NXE4 827 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 CPQQ9Y646 472 aa10.93□□□□□ -0.66
NUDCD3-210ENST00000493613 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 CLDN5O00501 218 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 SLC9A3R1O14745 358 aaPredicted RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 SCAMP3O14828 347 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 TM4SF5O14894 197 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 PHACTR2O75167 634 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 CLSTN1O94985 981 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 STAU1O95793 577 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 OAS1P00973 400 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 ZSCAN22P10073 491 aaPredicted RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 ATICP31939 592 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 AFMP43652 599 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 USP39Q53GS9 565 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 TCEAL6Q6IPX3 200 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 ANO7Q6IWH7 933 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 DDX42Q86XP3 938 aaKnown RBP eCLIP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 NUP93Q8N1F7 819 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 CCDC33Q8N5R6 958 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 KIAA1958Q8N8K9 716 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 TCEAL3Q969E4 200 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 B3GNT5Q9BYG0 378 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 XYLT2Q9H1B5 865 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 FAM13BQ9NYF5 915 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 CFAP97Q9P2B7 532 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 CGNQ9P2M7 1197 aaKnown RBP10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 MMP17Q9ULZ9 603 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 INVSQ9Y283 1065 aa10.92□□□□□ -0.66
NUDCD3-210ENST00000493613 ATP8B3O60423 1300 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 PVALEFA0A1B0GWK0 134 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 BCLAF3A2AJT9 711 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 ANTXRLA6NF34 631 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 EXOC3O60645 756 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 KRT37O76014 449 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 CAVIN2O95810 425 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 ADH1CP00326 375 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 MBL2P11226 248 aaPredicted RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 YWHAQP27348 245 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 EIF2DP41214 584 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 CASP4P49662 377 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 CDH8P55286 799 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 BIRC3Q13489 604 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 CUL4BQ13620 913 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 DHCR24Q15392 516 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 CRY1Q16526 586 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 KNOP1Q1ED39 458 aaKnown RBP10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 BMT2Q1RMZ1 405 aa10.91□□□□□ -0.66
NUDCD3-210ENST00000493613 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms