RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FCRL4Q96PJ5 515 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PUS7Q96PZ0 661 aaKnown RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 C1orf43Q9BWL3 253 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 CCDC8Q9H0W5 538 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-218ENST00000493430 WDCPQ9H6R7 721 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 ZDHHC8Q9ULC8 765 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PCDHA3Q9Y5H8 950 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PNPLA6Q8IY17 1366 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 PTCH1Q13635 1447 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 NRXN1Q9ULB1 1477 aa4.1□□□□□ -1.75
PTCD3-218ENST00000493430 RGPD1P0DJD0 1748 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 COL14A1Q05707 1796 aaKnown RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 QSOX1O00391 747 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 PPP6CO00743 305 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 SLC16A6O15403 523 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 TLR5O60602 858 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 PDHA1P08559 390 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 CYP2D6P10635 497 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 CCND1P24385 295 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 PCSK6P29122 969 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 MPGP29372 298 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 TOB1P50616 345 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 KRTAP10-9P60411 292 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 PRAMEF17Q5VTA0 474 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF66Q6ZN08 573 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF804AQ7Z570 1209 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 WDR53Q7Z5U6 358 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 PPP1R32Q7Z5V6 425 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 YTHDF3Q7Z739 585 aaKnown RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 TNPO1Q92973 898 aaKnown RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 REPS1Q96D71 796 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 SERHLQ9NQF3 203 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 SLC52A1Q9NWF4 448 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 ZNF521Q96K83 1311 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 FAM135BQ49AJ0 1406 aa4.09□□□□□ -1.75
PTCD3-218ENST00000493430 YTHDC2Q9H6S0 1430 aaKnown RBP4.09□□□□□ -1.75
PTCD3-218ENST00000493430 LRRC37A3O60309 1634 aa4.09□□□□□ -1.76
PTCD3-218ENST00000493430 LMO7Q8WWI1 1683 aa4.09□□□□□ -1.76
PTCD3-218ENST00000493430 RREB1Q92766 1687 aa4.09□□□□□ -1.76
PTCD3-218ENST00000493430 MAP2P11137 1827 aaKnown RBP4.09□□□□□ -1.76
PTCD3-218ENST00000493430 TISP43B9A030 160 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 SMIM22K7EJ46 135 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ZNF213O14771 459 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 SLC16A3O15427 465 aaKnown RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ONECUT2O95948 504 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 TUBB4AP04350 444 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 CDK11BP21127 795 aaKnown RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 CYP2C18P33260 490 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ATP7BP35670 1465 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 EEFSECP57772 596 aaKnown RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 NOGQ13253 232 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 KLF9Q13886 244 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ODF1Q14990 250 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ETFDHQ16134 617 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 PTPN21Q16825 1174 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 FAM160B1Q5W0V3 765 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ICE2Q659A1 982 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 SLC9A4Q6AI14 798 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 SLC18B1Q6NT16 456 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 TMEM108Q6UXF1 575 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 HEATR3Q7Z4Q2 680 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 CPA6Q8N4T0 437 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 DENND1AQ8TEH3 1009 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 DOT1LQ8TEK3 1739 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 QTRT1Q9BXR0 403 aaKnown RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 SLC13A1Q9BZW2 595 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 MRPL46Q9H2W6 279 aaKnown RBP4.08□□□□□ -1.76
PTCD3-218ENST00000493430 DLL3Q9NYJ7 618 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 ABCF2Q9UG63 623 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 TBC1D30Q9Y2I9 924 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 CAMTA1Q9Y6Y1 1673 aa4.08□□□□□ -1.76
PTCD3-218ENST00000493430 KAT6AQ92794 2004 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 ITGB4P16144 1822 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 ANKRD26Q9UPS8 1709 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 THSD7AQ9UPZ6 1657 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 DLC1Q96QB1 1528 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 DHX57Q6P158 1386 aaKnown RBP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 JCADQ9P266 1359 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 PRRT4C9JH25 899 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 H0YIZ8 118 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 M0QYG6 137 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 MOSPD3O75425 235 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 KATNA1O75449 491 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 NHLRC4P0CG21 123 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 PDCP20941 246 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 HK3P52790 923 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 CEP78Q5JTW2 689 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 PCID2Q5JVF3 399 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 TREML2Q5T2D2 321 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 RNF187Q5TA31 235 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 LAYNQ6UX15 382 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 MAVSQ7Z434 540 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 SH2D3AQ9BRG2 576 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 FEZ2Q9UHY8 353 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-218ENST00000493430 SH2B3Q9UQQ2 575 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms