RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 PNPLA8Q9NP80 782 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 NLRC4Q9NPP4 1024 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 TLR8Q9NR97 1041 aaKnown RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 ST7Q9NRC1 585 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 EPS15L1Q9UBC2 864 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 OBSL1O75147 1896 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 NUP210Q8TEM1 1887 aaPredicted RBP8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 NOTCH4Q99466 2003 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 PATJQ8NI35 1801 aa8.59□□□□□ -1.03
TM4SF1-204ENST00000493348 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 XPO1O14980 1071 aaKnown RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 CKMP06732 381 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 RALAP11233 206 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 GJA1P17302 382 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ACADSBP45954 432 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 PSEN1P49768 467 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 EPHA5P54756 1037 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF445P59923 1031 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 CYP4F8P98187 520 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 TAF10Q12962 218 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SLC5A9Q2M3M2 681 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 PRSS36Q5K4E3 855 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 LCLAT1Q6UWP7 414 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 CLEC20AQ6ZU45 233 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 RSRC2Q7L4I2 434 aaKnown RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 TMC8Q8IU68 726 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 UBR7Q8N806 425 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MAB21L3Q8N8X9 362 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 UBA3Q8TBC4 463 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ZSCAN18Q8TBC5 510 aaPredicted RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SHC3Q92529 594 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SMARCD2Q92925 531 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 IQCDQ96DY2 449 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MYRFLQ96LU7 910 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 KREMEN1Q96MU8 473 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 NECAB3Q96P71 396 aaPredicted RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ERGIC2Q96RQ1 377 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MYADMQ96S97 322 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SMOQ99835 787 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 NUP58Q9BVL2 599 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 UBXN6Q9BZV1 441 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 MIS12Q9H081 205 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 CSNK1G1Q9HCP0 422 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF334Q9HCZ1 680 aaPredicted RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 THG1LQ9NWX6 298 aaKnown RBP8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 FBXL21Q9UKT6 434 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 SORCS3Q9UPU3 1222 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 NME7Q9Y5B8 376 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 FHOD1Q9Y613 1164 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 ANAPC1Q9H1A4 1944 aa8.58□□□□□ -1.04
TM4SF1-204ENST00000493348 A0A1B0GTH6 734 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 A0A1W2PQC6 194 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 O00370 1275 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 CYP26A1O43174 497 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 SART1O43290 800 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 MBL2P11226 248 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 LCP1P13796 627 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 HMGA1P17096 107 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 PFKLP17858 780 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 APBA1Q02410 837 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 ARID5AQ03989 594 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 PDE4CQ08493 712 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 KCNMA1Q12791 1236 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 TDGQ13569 410 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 HECTD3Q5T447 861 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 PAQR9Q6ZVX9 377 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 GAREM2Q75VX8 874 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 UBALD2Q8IYN6 164 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 CMTM8Q8IZV2 173 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 IPO4Q8TEX9 1081 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF606Q8WXB4 792 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 TRIM62Q9BVG3 475 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 TTLL2Q9BWV7 592 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 KIF9Q9HAQ2 790 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 KCNK12Q9HB15 430 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 SIX2Q9NPC8 291 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 SEPT11Q9NVA2 429 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 IFNKQ9P0W0 207 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.57□□□□□ -1.04
TM4SF1-204ENST00000493348 HELZP42694 1942 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-204ENST00000493348 F8VZ95 297 aa8.56□□□□□ -1.04
TM4SF1-204ENST00000493348 RNF225M0QZC1 329 aaPredicted RBP8.56□□□□□ -1.04
TM4SF1-204ENST00000493348 STK25O00506 426 aa8.56□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF263O14978 683 aa8.56□□□□□ -1.04
TM4SF1-204ENST00000493348 TEX33O43247 280 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms