RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 RTN3O95197 1032 aaPredicted RBP15.91■□□□□ 0.14
TOM1-215ENST00000491987 PFKLP17858 780 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 CD58P19256 250 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 YWHAQP27348 245 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 GTF2H1P32780 548 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 PPP3CCP48454 512 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 MXI1P50539 228 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 SLC5A3P53794 718 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 SATB1Q01826 763 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 CCINQ13939 588 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 KRT39Q6A163 491 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 ISM2Q6H9L7 571 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 CRYBG2Q8N1P7 616 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 SPEM1Q8N4L4 309 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 CPA6Q8N4T0 437 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 C12orf29Q8N999 325 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 ZBTB44Q8NCP5 570 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 SCAMP5Q8TAC9 235 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 ATRIPQ8WXE1 791 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 FBXO32Q969P5 355 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 SMOQ99835 787 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 ECT2Q9H8V3 914 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 ZSCAN32Q9NX65 697 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 PCDHGA2Q9Y5H1 932 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 CACNA1IQ9P0X4 2223 aa15.91■□□□□ 0.14
TOM1-215ENST00000491987 HELZP42694 1942 aaKnown RBP15.9■□□□□ 0.14
TOM1-215ENST00000491987 F5P12259 2224 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 TRIM49BA6NDI0 452 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 LEFTY2O00292 366 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 TNFRSF10BO14763 440 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 OAS1P00973 400 aaKnown RBP15.9■□□□□ 0.14
TOM1-215ENST00000491987 TCF3P15923 654 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 ADORA2BP29275 332 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 CXCL12P48061 93 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
TOM1-215ENST00000491987 MAP3K7CLP57077 242 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 ZXDBP98169 803 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 INCA1Q0VD86 236 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 PPP2R5DQ14738 602 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 EML3Q32P44 896 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 DCAF17Q5H9S7 520 aaPredicted RBP15.9■□□□□ 0.14
TOM1-215ENST00000491987 TCERG1LQ5VWI1 586 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 NAIF1Q69YI7 327 aaPredicted RBP15.9■□□□□ 0.14
TOM1-215ENST00000491987 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 MAMSTRQ6ZN01 415 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 PDZD8Q8NEN9 1154 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 ZMIZ2Q8NF64 920 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 NELL1Q92832 810 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 SEMA4DQ92854 862 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 ATP2A3Q93084 1043 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 NT5C1AQ9BXI3 368 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 CYP3A43Q9HB55 503 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 SMPD4Q9NXE4 827 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 CPQQ9Y646 472 aa15.9■□□□□ 0.14
TOM1-215ENST00000491987 FANCMQ8IYD8 2048 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 STX10O60499 249 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 GADD45BO75293 160 aaPredicted RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 BEST1O76090 585 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 OLFM2O95897 454 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 TDGF1P13385 188 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 TRIM21P19474 475 aaKnown RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 GJA4P35212 333 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 SLC7A9P82251 487 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 FKBP3Q00688 224 aaKnown RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 AMPD2Q01433 879 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 GRSF1Q12849 480 aaKnown RBP eCLIP15.89■□□□□ 0.13
TOM1-215ENST00000491987 TMEM196Q5HYL7 178 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 FSTL4Q6MZW2 842 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 ZC3H3Q8IXZ2 948 aaKnown RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 SUMF1Q8NBK3 374 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 FBXL13Q8NEE6 735 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 OVCA2Q8WZ82 227 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 FBRSL1Q9HCM7 1045 aaKnown RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 C2orf42Q9NWW7 574 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 RAB20Q9NX57 234 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 GMIPQ9P107 970 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 CHORDC1Q9UHD1 332 aaPredicted RBP15.89■□□□□ 0.13
TOM1-215ENST00000491987 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
TOM1-215ENST00000491987 TRDMT1O14717 391 aaKnown RBP15.88■□□□□ 0.13
TOM1-215ENST00000491987 SCAMP3O14828 347 aaKnown RBP15.88■□□□□ 0.13
TOM1-215ENST00000491987 LILRB5O75023 590 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 CILPO75339 1184 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 FAM200BP0CF97 657 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 MBL2P11226 248 aaPredicted RBP15.88■□□□□ 0.13
TOM1-215ENST00000491987 LRRC63Q05C16 580 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 ZNF394Q53GI3 561 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 SYNPOQ8N3V7 929 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 WHAMMQ8TF30 809 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 JAKMIP2Q96AA8 810 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 CYFIP2Q96F07 1278 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 P2RY13Q9BPV8 354 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 FAM126AQ9BYI3 521 aaPredicted RBP15.88■□□□□ 0.13
TOM1-215ENST00000491987 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
TOM1-215ENST00000491987 CSNK1G1Q9HCP0 422 aa15.88■□□□□ 0.13
TOM1-215ENST00000491987 IL37Q9NZH6 218 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms