RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 IMPG2Q9BZV3 1241 aa8.78□□□□□ -1
LSM2-213ENST00000491421 ZMYND15Q9H091 742 aa8.78□□□□□ -1
LSM2-213ENST00000491421 SDCBP2Q9H190 292 aa8.78□□□□□ -1
LSM2-213ENST00000491421 DMAP1Q9NPF5 467 aaPredicted RBP8.78□□□□□ -1
LSM2-213ENST00000491421 TMEM30AQ9NV96 361 aa8.78□□□□□ -1
LSM2-213ENST00000491421 C2orf42Q9NWW7 574 aa8.78□□□□□ -1
LSM2-213ENST00000491421 GMEB2Q9UKD1 530 aa8.78□□□□□ -1
LSM2-213ENST00000491421 RAB23Q9ULC3 237 aa8.78□□□□□ -1
LSM2-213ENST00000491421 CACNA1IQ9P0X4 2223 aa8.78□□□□□ -1
LSM2-213ENST00000491421 NUP210Q8TEM1 1887 aaPredicted RBP8.78□□□□□ -1
LSM2-213ENST00000491421 PATJQ8NI35 1801 aa8.77□□□□□ -1
LSM2-213ENST00000491421 DMXL1Q9Y485 3027 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 GOLGA6L4A6NEF3 574 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 LEFTY2O00292 366 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 ATG13O75143 517 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 AP1G2O75843 785 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 RTN3O95197 1032 aaPredicted RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 NFATC1O95644 943 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 ASS1P00966 412 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 OAS1P00973 400 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 EGFP01133 1207 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 TRIM49P0CI25 452 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 TRIM49CP0CI26 452 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 TRIM21P19474 475 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 DRD1P21728 446 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 YWHAQP27348 245 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 GJA4P35212 333 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 PSMC2P35998 433 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 ASPAP45381 313 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 GCLMP48507 274 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 GALK1P51570 392 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SLC5A3P53794 718 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SLC7A9P82251 487 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 DMWDQ09019 674 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 NR1H3Q13133 447 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 ORC1Q13415 861 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 ADAM9Q13443 819 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 LPAL2Q16609 132 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 NAIF1Q69YI7 327 aaPredicted RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 SPOPLQ6IQ16 392 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 PRR23BQ6ZRT6 265 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 LONP2Q86WA8 852 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 UNC93AQ86WB7 457 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 PDZD8Q8NEN9 1154 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 OVCA2Q8WZ82 227 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 FBXO32Q969P5 355 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SMARCD1Q96GM5 515 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 KCNK16Q96T55 309 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 LINC00597Q9H2U6 94 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 MMRN2Q9H8L6 949 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 FBRSL1Q9HCM7 1045 aaKnown RBP8.77□□□□□ -1.01
LSM2-213ENST00000491421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.77□□□□□ -1.01
LSM2-213ENST00000491421 KRT82Q9NSB4 513 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SMPD4Q9NXE4 827 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 HMGXB4Q9UGU5 601 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SLC8A2Q9UPR5 921 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 CPQQ9Y646 472 aa8.77□□□□□ -1.01
LSM2-213ENST00000491421 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 RNF40O75150 1001 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 OLFM2O95897 454 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 MBL2P11226 248 aaPredicted RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 CCDC130P13994 396 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 HOXA6P31267 233 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 CNR2P34972 360 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 NUCB2P80303 420 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 ZXDBP98169 803 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 ENPEPQ07075 957 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 PPP3CAQ08209 521 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SRSF5Q13243 272 aaKnown RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 PNOCQ13519 176 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SIM2Q14190 667 aaPredicted RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 EDRF1Q3B7T1 1238 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 FBXO43Q4G163 708 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 ZCWPW2Q504Y3 356 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 LAIR1Q6GTX8 287 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 PKN3Q6P5Z2 889 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 PAQR9Q6ZVX9 377 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 FILIP1Q7Z7B0 1213 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 WDR5BQ86VZ2 330 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 DDX42Q86XP3 938 aaKnown RBP eCLIP8.76□□□□□ -1.01
LSM2-213ENST00000491421 SMYD4Q8IYR2 804 aaPredicted RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 FUKQ8N0W3 1084 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 FMR1NBQ8N0W7 255 aaPredicted RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 CRYBG2Q8N1P7 616 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 GPR161Q8N6U8 529 aaKnown RBP8.76□□□□□ -1.01
LSM2-213ENST00000491421 KIAA1958Q8N8K9 716 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 CCDC150Q8NCX0 1101 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SCAMP5Q8TAC9 235 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SLC2A14Q8TDB8 520 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 TAS1R2Q8TE23 839 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 CD101Q93033 1021 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 RMDN1Q96DB5 314 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 NIF3L1Q9GZT8 377 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 RNF38Q9H0F5 515 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 FAM49BQ9NUQ9 324 aa8.76□□□□□ -1.01
LSM2-213ENST00000491421 RMND1Q9NWS8 449 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms