RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SIGLEC11Q96RL6 698 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 SMAD5Q99717 465 aaKnown RBP5.04□□□□□ -1.6
PHC3-213ENST00000491258 SPC25Q9HBM1 224 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 TMEM184CQ9NVA4 438 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 FAM90A8PA6NJQ4 464 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 MYO1CO00159 1063 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 CRYABP02511 175 aaKnown RBP5.03□□□□□ -1.6
PHC3-213ENST00000491258 FGAP02671 866 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 FAM90A13PP0C7W8 464 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 FAM90A24PP0C7X0 464 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 PSG1P11464 419 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 CDKN1CP49918 316 aaPredicted RBP5.03□□□□□ -1.6
PHC3-213ENST00000491258 PRKAG1P54619 331 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 ID2Q02363 134 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 MLC1Q15049 377 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 PGS1Q32NB8 556 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 ZIK1Q3SY52 487 aaPredicted RBP5.03□□□□□ -1.6
PHC3-213ENST00000491258 C9orf47Q6ZRZ4 202 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 SFTPA1Q8IWL2 248 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 ZNF398Q8TD17 642 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 HIPK2Q9H2X6 1198 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 CPA4Q9UI42 421 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 BICRAQ9NZM4 1560 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 ZMYM2Q9UBW7 1377 aa5.03□□□□□ -1.6
PHC3-213ENST00000491258 PSMD9O00233 223 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 POU2F2P09086 479 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 CYP2C9P11712 490 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 RECQLP46063 649 aaPredicted RBP5.02□□□□□ -1.61
PHC3-213ENST00000491258 DGKEP52429 567 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 COPB1P53618 953 aaKnown RBP5.02□□□□□ -1.61
PHC3-213ENST00000491258 ERV3-1Q14264 604 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 MGAT5BQ3V5L5 792 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 PIP4P1Q86T03 277 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 PIM3Q86V86 326 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 ZNF548Q8NEK5 533 aaPredicted RBP5.02□□□□□ -1.61
PHC3-213ENST00000491258 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.02□□□□□ -1.61
PHC3-213ENST00000491258 PNISRQ8TF01 805 aaKnown RBP5.02□□□□□ -1.61
PHC3-213ENST00000491258 TMEM171Q8WVE6 324 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 HEY2Q9UBP5 337 aa5.02□□□□□ -1.61
PHC3-213ENST00000491258 TTC3P53804 2025 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 SNUPNO95149 360 aaKnown RBP5.01□□□□□ -1.61
PHC3-213ENST00000491258 MT-CO3P00414 261 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 PHKG2P15735 406 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 KCNA3P22001 575 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 ME1P48163 572 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 SLC11A2P49281 568 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
PHC3-213ENST00000491258 EGFLAMQ63HQ2 1017 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 TMEM65Q6PI78 240 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 MTFMTQ96DP5 389 aaKnown RBP5.01□□□□□ -1.61
PHC3-213ENST00000491258 CDK5RAP3Q96JB5 506 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 C17orf80Q9BSJ5 609 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 VPS33BQ9H267 617 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 ARMT1Q9H993 441 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 CNNM1Q9NRU3 951 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 PROCRQ9UNN8 238 aa5.01□□□□□ -1.61
PHC3-213ENST00000491258 SHROOM4Q9ULL8 1493 aa5□□□□□ -1.61
PHC3-213ENST00000491258 B4DGG1 531 aa5□□□□□ -1.61
PHC3-213ENST00000491258 TLR2O60603 784 aa5□□□□□ -1.61
PHC3-213ENST00000491258 IL33O95760 270 aa5□□□□□ -1.61
PHC3-213ENST00000491258 XRCC6P12956 609 aaKnown RBP eCLIP5□□□□□ -1.61
PHC3-213ENST00000491258 GKP32189 559 aa5□□□□□ -1.61
PHC3-213ENST00000491258 WNT3P56703 355 aa5□□□□□ -1.61
PHC3-213ENST00000491258 C4orf46Q504U0 113 aa5□□□□□ -1.61
PHC3-213ENST00000491258 DLK2Q6UY11 383 aa5□□□□□ -1.61
PHC3-213ENST00000491258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5□□□□□ -1.61
PHC3-213ENST00000491258 THOC3Q96J01 351 aaKnown RBP5□□□□□ -1.61
PHC3-213ENST00000491258 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
PHC3-213ENST00000491258 FAM234AQ9H0X4 552 aa5□□□□□ -1.61
PHC3-213ENST00000491258 ZNF112Q9UJU3 913 aa5□□□□□ -1.61
PHC3-213ENST00000491258 HS3ST3B1Q9Y662 390 aa5□□□□□ -1.61
PHC3-213ENST00000491258 CECR2Q9BXF3 1484 aa5□□□□□ -1.61
PHC3-213ENST00000491258 PMPCBO75439 489 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 EVA1CP58658 441 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 SRSF1Q07955 248 aaKnown RBP eCLIP4.99□□□□□ -1.61
PHC3-213ENST00000491258 LMAN2Q12907 356 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 NPY5RQ15761 445 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 TMTC4Q5T4D3 741 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 ANO7Q6IWH7 933 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 COLCA1Q6ZS62 124 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 ARFGAP1Q8N6T3 406 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 RSPRY1Q96DX4 576 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
PHC3-213ENST00000491258 SMAD6O43541 496 aaKnown RBP4.98□□□□□ -1.61
PHC3-213ENST00000491258 TOMM40O96008 361 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 THP07101 528 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 LARS2Q15031 903 aaKnown RBP4.98□□□□□ -1.61
PHC3-213ENST00000491258 SEC23BQ15437 767 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 LVRNQ6Q4G3 990 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 DEF8Q6ZN54 512 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 DCDC5Q6ZRR9 648 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 LIX1LQ8IVB5 337 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 SLC15A4Q8N697 577 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 DNAJC5GQ8N7S2 189 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 PRPF38AQ8NAV1 312 aaKnown RBP4.98□□□□□ -1.61
PHC3-213ENST00000491258 BPIFB1Q8TDL5 484 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms