RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 HPDLQ96IR7 371 aa22.05■■□□□ 1.12
CLIP2-208ENST00000491075 INTS13Q9NVM9 706 aa22.05■■□□□ 1.12
CLIP2-208ENST00000491075 CIZ1Q9ULV3 898 aaPredicted RBP22.05■■□□□ 1.12
CLIP2-208ENST00000491075 CPQQ9Y646 472 aa22.05■■□□□ 1.12
CLIP2-208ENST00000491075 ZFYVE26Q68DK2 2539 aa22.05■■□□□ 1.12
CLIP2-208ENST00000491075 ZNF840PA6NDX5 716 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 KIAA0391O15091 583 aaKnown RBP22.04■■□□□ 1.12
CLIP2-208ENST00000491075 KAT7O95251 611 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 ADH1CP00326 375 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 TNNC2P02585 160 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 CHRM1P11229 460 aaPredicted RBP22.04■■□□□ 1.12
CLIP2-208ENST00000491075 TXLNAP40222 546 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 RESTQ13127 1097 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 BYSLQ13895 437 aaKnown RBP22.04■■□□□ 1.12
CLIP2-208ENST00000491075 ERICH6BQ5W0A0 696 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 DDX42Q86XP3 938 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLIP2-208ENST00000491075 RLN3Q8WXF3 142 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 FNBP1Q96RU3 617 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 PCIF1Q9H4Z3 704 aa22.04■■□□□ 1.12
CLIP2-208ENST00000491075 BCCIPQ9P287 314 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLIP2-208ENST00000491075 PKD1L2Q7Z442 2459 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 SGK1O00141 431 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 OAS1P00973 400 aaKnown RBP22.03■■□□□ 1.12
CLIP2-208ENST00000491075 IDEP14735 1019 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 WARSP23381 471 aaKnown RBP22.03■■□□□ 1.12
CLIP2-208ENST00000491075 HOXD12P35452 270 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 TIE1P35590 1138 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 MAPK8P45983 427 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 SURF1Q15526 300 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 RRAGBQ5VZM2 374 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 ARMCX6Q7L4S7 300 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 SFTPA1Q8IWL2 248 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 TMEFF1Q8IYR6 380 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 MYCBPAPQ8TBZ2 947 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 ZCCHC14Q8WYQ9 949 aaKnown RBP22.03■■□□□ 1.12
CLIP2-208ENST00000491075 PCED1BQ96HM7 432 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 RNF38Q9H0F5 515 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 ARHGEF4Q9NR80 690 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 SMPD4Q9NXE4 827 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 NEUROG3Q9Y4Z2 214 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 PTPRJQ12913 1337 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 PCNX2A6NKB5 2137 aa22.03■■□□□ 1.12
CLIP2-208ENST00000491075 MYO18AQ92614 2054 aaKnown RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 FRMD3A2A2Y4 597 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 ENGP17813 658 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 GRIA2P42262 883 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 PTGER3P43115 390 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 KIR2DL1P43626 348 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 SLC6A11P48066 632 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 MESP2Q0VG99 397 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 LYSMD4Q5XG99 296 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 SLC23A3Q6PIS1 610 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 OR5B17Q8NGF7 314 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 HMGB4Q8WW32 186 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 C8orf48Q96LL4 319 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 SLITRK1Q96PX8 696 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 TMEM74BQ9NUR3 256 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 CFAP97Q9P2B7 532 aa22.02■■□□□ 1.12
CLIP2-208ENST00000491075 MBD1Q9UIS9 605 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 DSPP15924 2871 aaKnown RBP22.02■■□□□ 1.12
CLIP2-208ENST00000491075 ADAMTS9Q9P2N4 1935 aa22.02■■□□□ 1.11
CLIP2-208ENST00000491075 A0A0A0MRY4 1105 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 SRRM3A6NNA2 597 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-208ENST00000491075 F8VP50 259 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 ABL1P00519 1130 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 PDGFRBP09619 1106 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 ADH5P11766 374 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 TNFRSF4P43489 277 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 COL9A2Q14055 689 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-208ENST00000491075 DUOXA2Q1HG44 320 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 MAP7D1Q3KQU3 841 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 PEAR1Q5VY43 1037 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-208ENST00000491075 RHBDF2Q6PJF5 856 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 C12orf40Q86WS4 652 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 MMS19Q96T76 1030 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 TBC1D14Q9P2M4 693 aa22.01■■□□□ 1.11
CLIP2-208ENST00000491075 FBXO2Q9UK22 296 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-208ENST00000491075 GON4LQ3T8J9 2241 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 ZNF233A6NK53 670 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 UPK3BL1B0FP48 263 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 UPK3BL2E5RIL1 263 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 SCAMP3O14828 347 aaKnown RBP22■■□□□ 1.11
CLIP2-208ENST00000491075 ADAM23O75077 832 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 CD2BP2O95400 341 aaKnown RBP22■■□□□ 1.11
CLIP2-208ENST00000491075 KDSRQ06136 332 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 TAF10Q12962 218 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 C8orf34Q49A92 452 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 MDH1BQ5I0G3 518 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 TDRD10Q5VZ19 366 aaKnown RBP22■■□□□ 1.11
CLIP2-208ENST00000491075 KIAA1211LQ6NV74 962 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 WDR49Q8IV35 697 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 FRMD1Q8N878 549 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 FGFBP2Q9BYJ0 223 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 ELOVL4Q9GZR5 314 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 PANK4Q9NVE7 773 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 PILRBQ9UKJ0 227 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 SRPRBQ9Y5M8 271 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms