RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SNX16P57768 344 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 CDR2Q01850 454 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 SNX30Q5VWJ9 437 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 TRIM72Q6ZMU5 477 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 DDX1Q92499 740 aaKnown RBP16.71■□□□□ 0.27
TRA2A-208ENST00000490942 NOX5Q96PH1 765 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 HCFC1R1Q9NWW0 138 aa16.71■□□□□ 0.27
TRA2A-208ENST00000490942 NOCTQ9UK39 431 aaKnown RBP16.71■□□□□ 0.27
TRA2A-208ENST00000490942 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.27
TRA2A-208ENST00000490942 LRRC53A6NM62 1247 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 GYPCP04921 128 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 TPM1P09493 284 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 PNMA6AP0CW24 399 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 BMP1P13497 986 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 GABRR2P28476 465 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ACADSBP45954 432 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 PSEN1P49768 467 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ARID5BQ14865 1188 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 GAREM2Q75VX8 874 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 IRF2BP2Q7Z5L9 587 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 GPR152Q8TDT2 470 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ACSF2Q96CM8 615 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 SLC4A5Q9BY07 1137 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ZNF334Q9HCZ1 680 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 CNGB3Q9NQW8 809 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 EPS15L1Q9UBC2 864 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 SCML2Q9UQR0 700 aa16.7■□□□□ 0.26
TRA2A-208ENST00000490942 BZW2Q9Y6E2 419 aaKnown RBP16.7■□□□□ 0.26
TRA2A-208ENST00000490942 DENND4AQ7Z401 1863 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 AP5Z1O43299 807 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 MOSPD3O75425 235 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 SLC34A2O95436 690 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 MYL4P12829 197 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 IL9P15248 144 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 HNRNPH3P31942 346 aaKnown RBP16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TUBP50607 506 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ZNF75DP51815 510 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 CDR1P51861 262 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 USP46P62068 366 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 MTMR3Q13615 1198 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 SLC5A9Q2M3M2 681 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ARHGAP15Q53QZ3 475 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TJAP1Q5JTD0 557 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 PM20D1Q6GTS8 502 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 PPP1R2P3Q6NXS1 205 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TMEM110Q86TL2 294 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ADHFE1Q8IWW8 467 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ZDHHC14Q8IZN3 488 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 HS6ST3Q8IZP7 471 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 SHKBP1Q8TBC3 707 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 UBA3Q8TBC4 463 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
TRA2A-208ENST00000490942 FGF13Q92913 245 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 MAGED2Q9UNF1 606 aaPredicted RBP16.69■□□□□ 0.26
TRA2A-208ENST00000490942 C2orf16Q68DN1 1984 aa16.69■□□□□ 0.26
TRA2A-208ENST00000490942 PATJQ8NI35 1801 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 SART1O43290 800 aaKnown RBP16.68■□□□□ 0.26
TRA2A-208ENST00000490942 FBXO21O94952 628 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 CCR2P41597 374 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 KCNQ1P51787 676 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 NTHL1P78549 312 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 TAF10Q12962 218 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 ASIC2Q16515 512 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 PMF1Q6P1K2 205 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 DENND1BQ6P3S1 775 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 MON1AQ86VX9 555 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 NPAS3Q8IXF0 933 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 TDRD5Q8NAT2 981 aaKnown RBP16.68■□□□□ 0.26
TRA2A-208ENST00000490942 FEZF2Q8TBJ5 459 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 IRGQQ8WZA9 623 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 FBXO32Q969P5 355 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 MIS12Q9H081 205 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 ATXN3LQ9H3M9 355 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 TASP1Q9H6P5 420 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 CLIC5Q9NZA1 410 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
TRA2A-208ENST00000490942 NOTCH4Q99466 2003 aa16.67■□□□□ 0.26
TRA2A-208ENST00000490942 A0A1W2PRU2 124 aa16.67■□□□□ 0.26
TRA2A-208ENST00000490942 ZNF840PA6NDX5 716 aa16.67■□□□□ 0.26
TRA2A-208ENST00000490942 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms