RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 KCNB1Q14721 858 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 PSMD6Q15008 389 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
COL2A1-207ENST00000490609 C2orf27AQ580R0 203 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 PHTF2Q8N3S3 785 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 OLIG1Q8TAK6 271 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 WBP2Q969T9 261 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 C7orf25Q9BPX7 421 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 ZNF518BQ9C0D4 1074 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
COL2A1-207ENST00000490609 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 HCN2Q9UL51 889 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 GIPC1O14908 333 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL2A1-207ENST00000490609 STX6O43752 255 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 KCNK5O95279 499 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 PFKLP17858 780 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 MYL6P60660 151 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 PSMD2Q13200 908 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 DHCR24Q15392 516 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 SURF1Q15526 300 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 PMS2CLQ68D20 193 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 IL31Q6EBC2 164 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 C12orf50Q8NA57 414 aaPredicted RBP16.58■□□□□ 0.24
COL2A1-207ENST00000490609 MMS19Q96T76 1030 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 TPSD1Q9BZJ3 242 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 TRPM5Q9NZQ8 1165 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 WASF3Q9UPY6 502 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 CPQQ9Y646 472 aa16.58■□□□□ 0.24
COL2A1-207ENST00000490609 LNP1A1A4G5 178 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 PATE3B3GLJ2 98 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 CDX4O14627 284 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 TNFRSF10BO14763 440 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 SPTLC2O15270 562 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 PPP6R2O75170 966 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 NFATC1O95644 943 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 STAU1O95793 577 aaKnown RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 FAM163BP0C2L3 166 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 KIR2DL1P43626 348 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 CASP4P49662 377 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 DGKEP52429 567 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 CDH8P55286 799 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 SHC2P98077 582 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 MAPRE1Q15691 268 aaKnown RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 ST3GAL2Q16842 350 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 KIAA1958Q8N8K9 716 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 MDGA1Q8NFP4 955 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 DDX1Q92499 740 aaKnown RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 CCDC127Q96BQ5 260 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 DHX58Q96C10 678 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
COL2A1-207ENST00000490609 KIAA1586Q9HCI6 787 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 SMPD4Q9NXE4 827 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 IL37Q9NZH6 218 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 MMP17Q9ULZ9 603 aa16.57■□□□□ 0.24
COL2A1-207ENST00000490609 SGK1O00141 431 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 TRIM66O15016 1216 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 ADAM23O75077 832 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 CAVIN2O95810 425 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 CREB5Q02930 508 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 CRY1Q16526 586 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 WDR72Q3MJ13 1102 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 FAM26FQ5R3K3 315 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 IL17RCQ8NAC3 791 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 OR6B3Q8NGW1 331 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 SCAMP5Q8TAC9 235 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 ACDQ96AP0 544 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 CNOT6LQ96LI5 555 aaKnown RBP16.56■□□□□ 0.24
COL2A1-207ENST00000490609 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 ZDHHC4Q9NPG8 344 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-207ENST00000490609 ITPR1Q14643 2758 aa16.56■□□□□ 0.24
COL2A1-207ENST00000490609 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 GREM1O60565 184 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 RHOBTB1O94844 696 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 VNN1O95497 513 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 TNNI1P19237 187 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 PPP3CCP48454 512 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 CYP2J2P51589 502 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 ASIC1P78348 528 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 CLDN10P78369 228 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 NR1H3Q13133 447 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 STK38Q15208 465 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 TDRD10Q5VZ19 366 aaKnown RBP16.55■□□□□ 0.24
COL2A1-207ENST00000490609 RNF43Q68DV7 783 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 ANO7Q6IWH7 933 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 C12orf56Q8IXR9 622 aa16.55■□□□□ 0.24
COL2A1-207ENST00000490609 ALLCQ8N6M5 410 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms