RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZNF840PA6NDX5 716 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 ADAM23O75077 832 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 LDHAP00338 332 aaKnown RBP14.92□□□□□ -0.02
VARS-227ENST00000489979 ITPKAP23677 461 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 KDSRQ06136 332 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 RESTQ13127 1097 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 SEMA3BQ13214 749 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
VARS-227ENST00000489979 HSF5Q4G112 596 aaPredicted RBP14.92□□□□□ -0.02
VARS-227ENST00000489979 SPDYCQ5MJ68 293 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 EOGTQ5NDL2 527 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 L1TD1Q5T7N2 865 aaKnown RBP14.92□□□□□ -0.02
VARS-227ENST00000489979 RHBDF2Q6PJF5 856 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 VSTM1Q6UX27 236 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 NOC3LQ8WTT2 800 aaKnown RBP14.92□□□□□ -0.02
VARS-227ENST00000489979 PDE11AQ9HCR9 933 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 CRTAC1Q9NQ79 661 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 PILRBQ9UKJ0 227 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 CDH9Q9ULB4 789 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 CPQQ9Y646 472 aa14.92□□□□□ -0.02
VARS-227ENST00000489979 A0A0A0MRY4 1105 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 TCRBV21S2A2A0A5A6 115 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 UPK3BL1B0FP48 263 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 UPK3BL2E5RIL1 263 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 SLC9A3R1O14745 358 aaPredicted RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 GCNT3O95395 438 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 ABL1P00519 1130 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 CFIP05156 583 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 TMEM191BP0C7N4 346 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 GARTP22102 1010 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 ANXA13P27216 316 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 GJB2P29033 226 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 EIF2DP41214 584 aaKnown RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 DPP6P42658 865 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 KIR2DL1P43626 348 aaPredicted RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 ATXN3P54252 364 aaPredicted RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 CYP27A1Q02318 531 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 DPH6Q7L8W6 267 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 HDDC3Q8N4P3 179 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 DEFB119Q8N690 84 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 KIAA1958Q8N8K9 716 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 KBTBD7Q8WVZ9 684 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 CEP295NLQ96MC4 621 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 CBWD1Q9BRT8 395 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 TTLL2Q9BWV7 592 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 GTPBP2Q9BX10 602 aaKnown RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 PCIF1Q9H4Z3 704 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 ARHGEF4Q9NR80 690 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 CFAP97Q9P2B7 532 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 SEL1LQ9UBV2 794 aa14.91□□□□□ -0.02
VARS-227ENST00000489979 R3HCC1Q9Y3T6 440 aaKnown RBP14.91□□□□□ -0.02
VARS-227ENST00000489979 ANKRD11Q6UB99 2663 aaPredicted RBP14.9□□□□□ -0.02
VARS-227ENST00000489979 TRIM66O15016 1216 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 OLFM2O95897 454 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 BMP15O95972 392 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 ADH1CP00326 375 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 ADH5P11766 374 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 GRIA2P42262 883 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 TNFRSF4P43489 277 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 CASP5P51878 434 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 FAM193AP78312 1265 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 MYO1EQ12965 1108 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 MAPRE1Q15691 268 aaKnown RBP14.9□□□□□ -0.02
VARS-227ENST00000489979 DUOXA1Q1HG43 343 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 PEAR1Q5VY43 1037 aaPredicted RBP14.9□□□□□ -0.02
VARS-227ENST00000489979 LIMS2Q7Z4I7 341 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 SYCP3Q8IZU3 236 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 PCED1BQ96HM7 432 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 HPDLQ96IR7 371 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 ANKRD36BP1Q96IX9 119 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 EPSTI1Q96J88 318 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 SLC6A14Q9UN76 642 aa14.9□□□□□ -0.02
VARS-227ENST00000489979 PCDH15Q96QU1 1955 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 NBEAQ8NFP9 2946 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 F8VP50 259 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 H0Y626 953 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 TAF4O00268 1085 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 OPHN1O60890 802 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 TRIM16O95361 564 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 OAS1P00973 400 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 MBL2P11226 248 aaPredicted RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 GAP43P17677 238 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 WARSP23381 471 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 RDXP35241 583 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 HOXD12P35452 270 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 PPP3CCP48454 512 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 NOP14P78316 857 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 RPL6Q02878 288 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 TAF10Q12962 218 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 SF3A1Q15459 793 aaKnown RBP14.89□□□□□ -0.03
VARS-227ENST00000489979 USP49Q70CQ1 688 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 PHTF2Q8N3S3 785 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 CHCHD4Q8N4Q1 142 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 OR5B17Q8NGF7 314 aa14.89□□□□□ -0.03
VARS-227ENST00000489979 CEP76Q8TAP6 659 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms