RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 FBXO32Q969P5 355 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 ZFYVE19Q96K21 471 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 NT5C1BQ96P26 610 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 NELL2Q99435 816 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 GKN1Q9NS71 199 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 MTF2Q9Y483 593 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 FAM92AA1XBS5 289 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 FAM170BA6NMN3 283 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 MAN2B1O00754 1011 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 GALR2O43603 387 aaPredicted RBP20.24■□□□□ 0.83
EPHB4-207ENST00000489808 ABL1P00519 1130 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 CKMP06732 381 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 DCNP07585 359 aaKnown RBP20.24■□□□□ 0.83
EPHB4-207ENST00000489808 PDE6CP51160 858 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 YWHAEP62258 255 aaKnown RBP20.24■□□□□ 0.83
EPHB4-207ENST00000489808 TCF15Q12870 199 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 CLEC20AQ6ZU45 233 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 UBR7Q8N806 425 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 PJA1Q8NG27 643 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 CNOT6LQ96LI5 555 aaKnown RBP20.24■□□□□ 0.83
EPHB4-207ENST00000489808 DUSP16Q9BY84 665 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 OSBPL6Q9BZF3 934 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 LTB4R2Q9NPC1 389 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 DLGAP2Q9P1A6 1054 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 DACH1Q9UI36 760 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 ZNF318Q5VUA4 2279 aa20.24■□□□□ 0.83
EPHB4-207ENST00000489808 HHLA1C9JL84 531 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 UBXN2BQ14CS0 331 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 TPD52L1Q16890 204 aaPredicted RBP20.23■□□□□ 0.83
EPHB4-207ENST00000489808 CT47A1Q5JQC4 288 aaPredicted RBP20.23■□□□□ 0.83
EPHB4-207ENST00000489808 SNX30Q5VWJ9 437 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 ARHGAP17Q68EM7 881 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 CCDC105Q8IYK2 499 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 DTWD2Q8NBA8 298 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 RIN3Q8TB24 985 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 FAM83CQ9BQN1 747 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 RNF38Q9H0F5 515 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 FBXO44Q9H4M3 255 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 PNPLA8Q9NP80 782 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 ARHGAP26Q9UNA1 814 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 MRPS17Q9Y2R5 130 aaKnown RBP20.23■□□□□ 0.83
EPHB4-207ENST00000489808 PIAS3Q9Y6X2 628 aa20.23■□□□□ 0.83
EPHB4-207ENST00000489808 ZDHHC11BP0C7U3 371 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 TCF3P15923 654 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 KPNA1P52294 538 aaPredicted RBP20.22■□□□□ 0.83
EPHB4-207ENST00000489808 PTPN5P54829 565 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 SLC7A9P82251 487 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 TNK2Q07912 1038 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 RBM43Q6ZSC3 357 aaKnown RBP20.22■□□□□ 0.83
EPHB4-207ENST00000489808 SH3RF2Q8TEC5 729 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 UBXN6Q9BZV1 441 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 THAP9Q9H5L6 903 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 C8orf33Q9H7E9 229 aaPredicted RBP20.22■□□□□ 0.83
EPHB4-207ENST00000489808 GTSE1Q9NYZ3 720 aa20.22■□□□□ 0.83
EPHB4-207ENST00000489808 OLFM2O95897 454 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 OAS1P00973 400 aaKnown RBP20.21■□□□□ 0.83
EPHB4-207ENST00000489808 ACO1P21399 889 aaKnown RBP20.21■□□□□ 0.83
EPHB4-207ENST00000489808 TARSP26639 723 aaKnown RBP20.21■□□□□ 0.83
EPHB4-207ENST00000489808 ZXDBP98169 803 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 FZD5Q13467 585 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 ZNF77Q15935 545 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 CC2D1AQ6P1N0 951 aaPredicted RBP20.21■□□□□ 0.83
EPHB4-207ENST00000489808 RRAGAQ7L523 313 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 GPRIN1Q7Z2K8 1008 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 PPM1KQ8N3J5 372 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 ANKRD52Q8NB46 1076 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 TTC8Q8TAM2 541 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 FAM3CQ92520 227 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 KAT5Q92993 513 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 MSANTD3Q96H12 275 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 GMIPQ9P107 970 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 KIAA1257Q9ULG3 409 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 SCML2Q9UQR0 700 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 WDFY4Q6ZS81 3184 aa20.21■□□□□ 0.83
EPHB4-207ENST00000489808 NCAM2O15394 837 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 VDRP11473 427 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 GCNT1Q02742 428 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 MTF1Q14872 753 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 ITPRIPL2Q3MIP1 535 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 HECTD3Q5T447 861 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 TMEM270Q6UE05 265 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 ARHGEF19Q8IW93 802 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 ZNF687Q8N1G0 1237 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 JAKMIP2Q96AA8 810 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 CLDN23Q96B33 292 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 INTS2Q9H0H0 1204 aaKnown RBP20.2■□□□□ 0.82
EPHB4-207ENST00000489808 HPS4Q9NQG7 708 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 PCDHB4Q9Y5E5 795 aa20.2■□□□□ 0.82
EPHB4-207ENST00000489808 PTPRDP23468 1912 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 RNF225M0QZC1 329 aaPredicted RBP20.19■□□□□ 0.82
EPHB4-207ENST00000489808 COCHO43405 550 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 MBD3O95983 291 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 MTIF2P46199 727 aaKnown RBP20.19■□□□□ 0.82
EPHB4-207ENST00000489808 SOX9P48436 509 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 PGFP49763 221 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 KIF11P52732 1056 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 USP4Q13107 963 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 RUNX3Q13761 415 aa20.19■□□□□ 0.82
EPHB4-207ENST00000489808 PDGFRLQ15198 375 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms