RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 GRIK1P39086 918 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CASP4P49662 377 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 LIMK1P53667 647 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 SLC7A9P82251 487 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CYP27A1Q02318 531 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 DMC1Q14565 340 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 KCNB1Q14721 858 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 BMT2Q1RMZ1 405 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 FBXO43Q4G163 708 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 C12orf40Q86WS4 652 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CAMKK1Q8N5S9 505 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CCDC127Q96BQ5 260 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 LOXL4Q96JB6 756 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
ACTN4-206ENST00000489451 MMS19Q96T76 1030 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 B3GNT5Q9BYG0 378 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 SDCBP2Q9H190 292 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CUEDC2Q9H467 287 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CUTAO60888 179 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 MPLP40238 635 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CYP2J2P51589 502 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 MYL6P60660 151 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 TAF10Q12962 218 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CUL4BQ13620 913 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 PKP1Q13835 747 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 FOXD4L5Q5VV16 416 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-206ENST00000489451 TDRD10Q5VZ19 366 aaKnown RBP12.53□□□□□ -0.4
ACTN4-206ENST00000489451 PAQR9Q6ZVX9 377 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-206ENST00000489451 FOXD4L4Q8WXT5 416 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-206ENST00000489451 WBP2Q969T9 261 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 C8orf48Q96LL4 319 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CEP295NLQ96MC4 621 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 SMYD3Q9H7B4 428 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 EBF1Q9UH73 591 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CPQQ9Y646 472 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 UBE4BO95155 1302 aa12.53□□□□□ -0.4
ACTN4-206ENST00000489451 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.4
ACTN4-206ENST00000489451 THADAQ6YHU6 1953 aa12.52□□□□□ -0.4
ACTN4-206ENST00000489451 TMEM8BA6NDV4 472 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 SRRM3A6NNA2 597 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 TAF4O00268 1085 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 TRIM66O15016 1216 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 KLRC4O43908 158 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 APBB3O95704 486 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PFKLP17858 780 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PTPN1P18031 435 aaKnown RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 TNNI1P19237 187 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 BCKDHBP21953 392 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 GNL1P36915 607 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 SLC6A11P48066 632 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PGFP49763 221 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 CDH8P55286 799 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 SEC13P55735 322 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 AMPD2Q01433 879 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 AASDHQ4L235 1098 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-206ENST00000489451 STXBP4Q6ZWJ1 553 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 IQUBQ8NA54 791 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 PLXND1Q9Y4D7 1925 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
ACTN4-206ENST00000489451 MYO18AQ92614 2054 aaKnown RBP12.51□□□□□ -0.41
ACTN4-206ENST00000489451 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-206ENST00000489451 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 VNN1O95497 513 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 NFATC1O95644 943 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 CLDN10P78369 228 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 PSMD2Q13200 908 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 DHCR24Q15392 516 aa12.51□□□□□ -0.41
ACTN4-206ENST00000489451 STPG1Q5TH74 334 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms