RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 OR10T2Q8NGX3 314 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 SNX19Q92543 992 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 ZNF578Q96N58 590 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-233ENST00000489352 DPH1Q9BZG8 443 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 DSEQ9UL01 958 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 ARHGAP26Q9UNA1 814 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 SNX11Q9Y5W9 270 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 MYH10P35580 1976 aa12.43□□□□□ -0.42
HDAC6-233ENST00000489352 A0A1W2PQF6 199 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 LEFTY2O00292 366 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 LAD1O00515 517 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 PAX3P23760 479 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 LRPAP1P30533 357 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 RPL10AP62906 217 aaKnown RBP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 SPAG1Q07617 926 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 C12orf40Q86WS4 652 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 NAT16Q8N8M0 369 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 IGSF8Q969P0 613 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 CNDP2Q96KP4 475 aaKnown RBP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 MRGPRX1Q96LB2 322 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 ARHGAP9Q9BRR9 750 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 CD93Q9NPY3 652 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 WSB2Q9NYS7 404 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
HDAC6-233ENST00000489352 CLCA2Q9UQC9 943 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
HDAC6-233ENST00000489352 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 C2orf78A6NCI8 922 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 CCDC169A6NNP5 214 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 METTL12A8MUP2 240 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 KCNK3O14649 394 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 DFNA5O60443 496 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 CYP3A5P20815 502 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 OXTRP30559 389 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 MATR3P43243 847 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC6-233ENST00000489352 LILRA4P59901 499 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 NFKB2Q00653 900 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 IL9RQ01113 521 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 GAD2Q05329 585 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 DNAJC3Q13217 504 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 SLC10A6Q3KNW5 377 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 SDHAF4Q5VUM1 108 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 PADI6Q6TGC4 694 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 MPZL3Q6UWV2 235 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 ADAT2Q7Z6V5 191 aaKnown RBP12.41□□□□□ -0.42
HDAC6-233ENST00000489352 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 TRMT2BQ96GJ1 504 aaKnown RBP12.41□□□□□ -0.42
HDAC6-233ENST00000489352 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
HDAC6-233ENST00000489352 SUV39H1O43463 412 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
HDAC6-233ENST00000489352 CYP11B2P19099 503 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 ABCB4P21439 1286 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 GPR15P49685 360 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 DDR2Q16832 855 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 SEZ6Q53EL9 994 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 FBXL19Q6PCT2 694 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 RHBDF2Q6PJF5 856 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 SNRNP27Q8WVK2 155 aaKnown RBP12.4□□□□□ -0.42
HDAC6-233ENST00000489352 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 TARS2Q9BW92 718 aaKnown RBP12.4□□□□□ -0.42
HDAC6-233ENST00000489352 PLEKHA5Q9HAU0 1116 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 LRRC4CQ9HCJ2 640 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 PTPRHQ9HD43 1115 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
HDAC6-233ENST00000489352 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.43
HDAC6-233ENST00000489352 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 M0R2N6 131 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 TADA3O75528 432 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-233ENST00000489352 ACADMP11310 421 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 IFNAR1P17181 557 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 TSPY1Q01534 308 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 PPP2R3AQ06190 1150 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
HDAC6-233ENST00000489352 STARD3Q14849 445 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 NFE2Q16621 373 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-233ENST00000489352 XKR5Q6UX68 686 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 KDM7AQ6ZMT4 941 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 CCDC81Q6ZN84 652 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 LRRTM3Q86VH5 581 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 LIN37Q96GY3 246 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-233ENST00000489352 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 NUP58Q9BVL2 599 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 POLD4Q9HCU8 107 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms