RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 GLI1P08151 1106 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 FLT3P36888 993 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 ZNF143P52747 638 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 MAP3K7CLP57077 242 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 MRPS5P82675 430 aaKnown RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 DSG1Q02413 1049 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 CKAP4Q07065 602 aaKnown RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 SLC39A12Q504Y0 691 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 OR6B2Q6IFH4 312 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 SPATA2LQ8IUW3 424 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 UBL4BQ8N7F7 174 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 CEP112Q8N8E3 955 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 MYRIPQ8NFW9 859 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 SPPL2BQ8TCT7 592 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 ALG3Q92685 438 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 KRT35Q92764 455 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 TMEM169Q96HH4 297 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 ABHD8Q96I13 439 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 C11orf84Q9BUA3 381 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 RHOBTB2Q9BYZ6 727 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 CNGB3Q9NQW8 809 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 SPG21Q9NZD8 308 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 USP3Q9Y6I4 520 aa12.07□□□□□ -0.48
C9orf3-220ENST00000489318 ZNF638Q14966 1978 aaKnown RBP12.07□□□□□ -0.48
C9orf3-220ENST00000489318 MTMR11A4FU01 709 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 TMEM110-MUSTN1A8MSY1 372 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 TNFRSF10BO14763 440 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 ZNF185O15231 689 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 HSF2BPO75031 334 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 VNN2O95498 520 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 SYN1P17600 705 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 GPD1P21695 349 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 BDNFP23560 247 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 PTPN9P43378 593 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 MARCKSL1P49006 195 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 GLUD2P49448 558 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 TKTL1P51854 596 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 DAOAP59103 153 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 PSMD5Q16401 504 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 EFHC1Q5JVL4 640 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 PM20D1Q6GTS8 502 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-220ENST00000489318 BHLHA9Q7RTU4 235 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 TAS1R1Q7RTX1 841 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 GPRIN1Q7Z2K8 1008 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 BNIPLQ7Z465 357 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 CEP57Q86XR8 500 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 SIX6OS1Q8N1H7 587 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 FIBCD1Q8N539 461 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 EMC1Q8N766 993 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 ACTRT1Q8TDG2 376 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 IRGQQ8WZA9 623 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 C8orf48Q96LL4 319 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 CEP295NLQ96MC4 621 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 RAD9AQ99638 391 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 CNPY3Q9BT09 278 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 LRRC4Q9HBW1 653 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 HSFX1Q9UBD0 423 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-220ENST00000489318 PCDHB5Q9Y5E4 795 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
C9orf3-220ENST00000489318 F8VP50 259 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PIK3R2O00459 728 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 KCNK3O14649 394 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 TRIM66O15016 1216 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
C9orf3-220ENST00000489318 LRCH4O75427 683 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 TADA3O75528 432 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 LCP1P13796 627 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PSMA2P25787 234 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 CXCR5P32302 372 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PCK1P35558 622 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 RWDD2BP57060 319 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 TAS2R40P59535 323 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 ROR1Q01973 937 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 SLC25A11Q02978 314 aaKnown RBP12.05□□□□□ -0.48
C9orf3-220ENST00000489318 TAF5Q15542 800 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PTPROQ16827 1216 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
C9orf3-220ENST00000489318 PRSS55Q6UWB4 352 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-220ENST00000489318 BEND5Q7L4P6 421 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 RHOT1Q8IXI2 618 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 KATNAL2Q8IYT4 538 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 ARFGAP1Q8N6T3 406 aa12.05□□□□□ -0.48
C9orf3-220ENST00000489318 CENPIQ92674 756 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms