RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
CBWD1-216ENST00000489272 TMEM79Q9BSE2 394 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 TRIM54Q9BYV2 358 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 SLC12A5Q9H2X9 1139 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 ZSCAN32Q9NX65 697 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 ZNF112Q9UJU3 913 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 SNX14Q9Y5W7 946 aa4.27□□□□□ -1.73
CBWD1-216ENST00000489272 H3BML4 177 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 AP4M1O00189 453 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 AP1G1O43747 822 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 GCATO75600 419 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 VNN1O95497 513 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 MYCLP12524 364 aaPredicted RBP4.26□□□□□ -1.73
CBWD1-216ENST00000489272 ATP5F1P24539 256 aaPredicted RBP4.26□□□□□ -1.73
CBWD1-216ENST00000489272 IL1R2P27930 398 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 ALDH5A1P51649 535 aaPredicted RBP4.26□□□□□ -1.73
CBWD1-216ENST00000489272 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
CBWD1-216ENST00000489272 RAPGEF1Q13905 1077 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 MLC1Q15049 377 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 FAM187BQ17R55 369 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 LY6KQ17RY6 165 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 PLA1AQ53H76 456 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 CERCAMQ5T4B2 595 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 DPY19L3Q6ZPD9 716 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 OR6B3Q8NGW1 331 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 PRR25Q96S07 402 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 MMS19Q96T76 1030 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 NMRK2Q9NPI5 230 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 AMFRQ9UKV5 643 aa4.26□□□□□ -1.73
CBWD1-216ENST00000489272 SCAF8Q9UPN6 1271 aaKnown RBP4.26□□□□□ -1.73
CBWD1-216ENST00000489272 A0A1W2PPL8 197 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 TMEM232C9JQI7 657 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 PSMD9O00233 223 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 BTN3A1O00481 513 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 SOCS2O14508 198 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 DSCR3O14972 297 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 ABLIM3O94929 683 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 NPR1P16066 1061 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 IBSPP21815 317 aaPredicted RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 HTR1BP28222 390 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 NR4A2P43354 598 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 ARFIP2P53365 341 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 PTPROQ16827 1216 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 ZNF260Q3ZCT1 412 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 RNASE12Q5GAN4 147 aaKnown RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 BCDIN3DQ7Z5W3 292 aaKnown RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 MRPL10Q7Z7H8 261 aaKnown RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 SFTPA1Q8IWL2 248 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 MPP5Q8N3R9 675 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 NANOGP1Q8N7R0 232 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 BPIFB1Q8TDL5 484 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 ADAMTS18Q8TE60 1221 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 TMEM171Q8WVE6 324 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 CUL5Q93034 780 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 C17orf80Q9BSJ5 609 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 MS4A7Q9GZW8 240 aaPredicted RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 PNMA8BQ9ULN7 279 aaPredicted RBP4.25□□□□□ -1.73
CBWD1-216ENST00000489272 AFG3L2Q9Y4W6 797 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 FER1L4A9Z1Z3 1794 aa4.25□□□□□ -1.73
CBWD1-216ENST00000489272 TCRBV5S1A1TA0A578 114 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 BTBD19C9JJ37 291 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 RNF8O76064 485 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 FGAP02671 866 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 FGBP02675 491 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 PHKG2P15735 406 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 HSPA6P17066 643 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 NCLP19338 710 aaKnown RBP4.24□□□□□ -1.73
CBWD1-216ENST00000489272 GKP32189 559 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 SLC13A2Q13183 592 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 CTBP1Q13363 440 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 RAB32Q13637 225 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 LRRC41Q15345 812 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 RAB11FIP4Q86YS3 637 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 SPARTQ8N0X7 666 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
CBWD1-216ENST00000489272 AIFM3Q96NN9 605 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 GBA2Q9HCG7 927 aaPredicted RBP4.24□□□□□ -1.73
CBWD1-216ENST00000489272 ASIC5Q9NY37 505 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
CBWD1-216ENST00000489272 GABBR1Q9UBS5 961 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 PAXBP1Q9Y5B6 917 aa4.24□□□□□ -1.73
CBWD1-216ENST00000489272 MYMKA6NI61 221 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 CES2O00748 559 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 FCHO1O14526 889 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 UBXN7O94888 489 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 PRKAR1BP31321 381 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 MTHFSP49914 203 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 BCAT1P54687 386 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 PIN1Q13526 163 aaPredicted RBP4.23□□□□□ -1.73
CBWD1-216ENST00000489272 CCNIQ14094 377 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 C4orf46Q504U0 113 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 MEX3CQ5U5Q3 659 aaKnown RBP4.23□□□□□ -1.73
CBWD1-216ENST00000489272 DENND2CQ68D51 928 aa4.23□□□□□ -1.73
CBWD1-216ENST00000489272 ADAMTS15Q8TE58 950 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms