RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CYP2S1Q96SQ9 504 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 COMMD8Q9NX08 183 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SMPD4Q9NXE4 827 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 MAN1B1Q9UKM7 699 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 FBXO4Q9UKT5 387 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 RAB23Q9ULC3 237 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SH3BP1Q9Y3L3 701 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 VPS13AQ96RL7 3174 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 TRIM49BA6NDI0 452 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF840PA6NDX5 716 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 ATG13O75143 517 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-232ENST00000489053 LMNAP02545 664 aaKnown RBP9.66□□□□□ -0.86
HDAC6-232ENST00000489053 SP9P0CG40 484 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CD19P15391 556 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CXCL12P48061 93 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 USP46P62068 366 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 MTAPQ13126 283 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 PAK1Q13153 545 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CAMK4Q16566 473 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF528Q3MIS6 628 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF394Q53GI3 561 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 C1orf220Q5T0J3 134 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 TRIM68Q6AZZ1 485 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CRYBG2Q8N1P7 616 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 KCNK16Q96T55 309 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 TTLL2Q9BWV7 592 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 FAM126AQ9BYI3 521 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-232ENST00000489053 SDCBP2Q9H190 292 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 TLR8Q9NR97 1041 aaKnown RBP9.66□□□□□ -0.86
HDAC6-232ENST00000489053 HESX1Q9UBX0 185 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 HMGXB4Q9UGU5 601 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 ARHGAP26Q9UNA1 814 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 CPQQ9Y646 472 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 R4GN57 208 aa9.66□□□□□ -0.86
HDAC6-232ENST00000489053 DOCK6Q96HP0 2047 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 GOLGA6L22H0YM25 854 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 LEFTY2O00292 366 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ARNTLO00327 626 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CILPO75339 1184 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 TADA3O75528 432 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ADH1CP00326 375 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CCDC192P0DO97 292 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ARSAP15289 507 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ACO1P21399 889 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 DRD1P21728 446 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 TBXAS1P24557 533 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CACNA2D1P54289 1103 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 LRMPQ12912 555 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF77Q15935 545 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 FILIP1Q7Z7B0 1213 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 FUKQ8N0W3 1084 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 C12orf29Q8N999 325 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 TRIML1Q8N9V2 468 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 SPATA20Q8TB22 786 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 FAXDC2Q96IV6 333 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 LRRC3BQ96PB8 259 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 SLC22A12Q96S37 553 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CDK5RAP1Q96SZ6 601 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 P2RY13Q9BPV8 354 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 FAM83CQ9BQN1 747 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 FAM124BQ9H5Z6 455 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ECT2Q9H8V3 914 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CISHQ9NSE2 258 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 ZSCAN32Q9NX65 697 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 GMIPQ9P107 970 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 DLGAP2Q9P1A6 1054 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CFAP97Q9P2B7 532 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 TBC1D14Q9P2M4 693 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 CHORDC1Q9UHD1 332 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 PCDHGA2Q9Y5H1 932 aa9.65□□□□□ -0.86
HDAC6-232ENST00000489053 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
HDAC6-232ENST00000489053 F5P12259 2224 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 FRYLO94915 3013 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 NCANO14594 1321 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 PROB1E7EW31 1015 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 IRF1P10914 325 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 RALAP11233 206 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 TUBP50607 506 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 PMS1P54277 932 aaKnown RBP9.64□□□□□ -0.87
HDAC6-232ENST00000489053 STX17P56962 302 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 SLC7A9P82251 487 aa9.64□□□□□ -0.87
HDAC6-232ENST00000489053 USP4Q13107 963 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms