RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 PBKQ96KB5 322 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 HSFY1Q96LI6 401 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 RNPC3Q96LT9 517 aaKnown RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PGLYRP2Q96PD5 576 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PKMYT1Q99640 499 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 SMOQ99835 787 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.27□□□□□ -1.259e-7■■□□□ 12.5
PDAP1-203ENST00000488214 TTPALQ9BTX7 342 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZCWPW1Q9H0M4 648 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 SPDYE4A6NLX3 237 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 F8VP50 259 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PDE2AO00408 941 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 C2CD2LO14523 706 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CAPN15O75808 1086 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 GABBR2O75899 941 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 FBXO21O94952 628 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 URODP06132 367 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TCF4P15884 667 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PRLRP16471 622 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SDC4P31431 198 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CA8P35219 290 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PPM1AP35813 382 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SCNN1AP37088 669 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 GRIK1P39086 918 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PAFAH1B1P43034 410 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 GLUD2P49448 558 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SULT1E1P49888 294 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 RWDD2BP57060 319 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ADCY1Q08828 1119 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PIGHQ14442 188 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TAF5Q15542 800 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 NFE2Q16621 373 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 USP41Q3LFD5 358 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CFAP221Q4G0U5 840 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TMEM240Q5SV17 173 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 KIAA1841Q6NSI8 718 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TRNP1Q6NT89 227 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ANKS3Q6ZW76 656 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 C16orf59Q7L2K0 433 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SLC26A9Q7LBE3 791 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TMEM110Q86TL2 294 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 LRRTM3Q86VH5 581 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CREG2Q8IUH2 290 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC50Q8IVM0 306 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SCN4BQ8IWT1 228 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SCUBE3Q8IX30 993 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 RHOT1Q8IXI2 618 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SLC39A11Q8N1S5 342 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 NIPA2Q8N8Q9 360 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 STKLD1Q8NE28 680 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ZMIZ2Q8NF64 920 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 FNIP1Q8TF40 1166 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 KCTD13Q8WZ19 329 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 GOLGA1Q92805 767 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ACSF2Q96CM8 615 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CFAP57Q96MR6 1250 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 KCNK16Q96T55 309 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SLC9A7Q96T83 725 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SEPT5Q99719 369 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 LBHD1Q9BQE6 289 aaPredicted RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ZBED2Q9BTP6 218 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 HERC2P3Q9BVR0 1158 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 VN1R3Q9BXE9 311 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 ULBP1Q9BZM6 244 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CARD9Q9H257 536 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 MTIF3Q9H2K0 278 aaKnown RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 TMEM30AQ9NV96 361 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 MTRRQ9UBK8 725 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.26□□□□□ -1.25
PDAP1-203ENST00000488214 PCDHB5Q9Y5E4 795 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 CDY1Q9Y6F8 540 aa7.26□□□□□ -1.25
PDAP1-203ENST00000488214 MTMR11A4FU01 709 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CARNS1A5YM72 827 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 C2CD4BA6NLJ0 364 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 EFCAB8A8MWE9 144 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 HHLA1C9JL84 531 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CES2O00748 559 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 DPYSL4O14531 572 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 TRIM66O15016 1216 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 HSF2BPO75031 334 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 LRCH4O75427 683 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CSPG5O95196 566 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 GJB5O95377 273 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 FGGP02679 453 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SOD2P04179 222 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 PDGFRAP16234 1089 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 RPL17P18621 184 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CYP2F1P24903 491 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 DNAJB2P25686 324 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 RPL34P49207 117 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 GPR15P49685 360 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 NDUFV1P49821 464 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ZNF143P52747 638 aaPredicted RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SLC5A3P53794 718 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 DAOAP59103 153 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 MRPS5P82675 430 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ATP11AP98196 1134 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms