RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PDGFRLQ15198 375 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 ZNF528Q3MIS6 628 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 FBXL13Q8NEE6 735 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 SH3RF2Q8TEC5 729 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 SMOQ99835 787 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 RNF38Q9H0F5 515 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 DMAP1Q9NPF5 467 aaPredicted RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 FAM49BQ9NUQ9 324 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 IL37Q9NZH6 218 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 ZFHX2Q9C0A1 2572 aaPredicted RBP12.15□□□□□ -0.47
SPEN-205ENST00000487496 GREB1Q4ZG55 1949 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 PRR23AA6NEV1 266 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CILPO75339 1184 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 BEST1O76090 585 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 OLFM2O95897 454 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 ARSAP15289 507 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 TCF3P15923 654 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CD58P19256 250 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 BMP6P22004 513 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 PPP1R2P41236 205 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 SLC5A3P53794 718 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 SLC7A9P82251 487 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 ZXDBP98169 803 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 USP4Q13107 963 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 LRRC32Q14392 662 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 GAS6Q14393 721 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 PON2Q15165 354 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CBWD6Q4V339 395 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 DCAF17Q5H9S7 520 aaPredicted RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 CBWD3Q5JTY5 395 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 DGKKQ5KSL6 1271 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CBWD5Q5RIA9 395 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 ZC3H14Q6PJT7 736 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 TSSK4Q6SA08 328 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 FBXO32Q969P5 355 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 IER2Q9BTL4 223 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 CSNK1G1Q9HCP0 422 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 RBM12Q9NTZ6 932 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 DUS2Q9NX74 493 aaKnown RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 ARMCX3Q9UH62 379 aaPredicted RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 CHORDC1Q9UHD1 332 aaPredicted RBP12.14□□□□□ -0.47
SPEN-205ENST00000487496 WNT6Q9Y6F9 365 aa12.14□□□□□ -0.47
SPEN-205ENST00000487496 FAM92AA1XBS5 289 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 LEFTY2O00292 366 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 ADORA2BP29275 332 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 IFNAR2P48551 515 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 MAP3K7CLP57077 242 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 CCINQ13939 588 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 MORC3Q14149 939 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 OVCA2Q8WZ82 227 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 NELL1Q92832 810 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 TATDN2Q93075 761 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 CYFIP2Q96F07 1278 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 ECT2Q9H8V3 914 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SPEN-205ENST00000487496 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 ANAPC1Q9H1A4 1944 aa12.13□□□□□ -0.47
SPEN-205ENST00000487496 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
SPEN-205ENST00000487496 MYO15AQ9UKN7 3530 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 DMDP11532 3685 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 BIN1O00499 593 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
SPEN-205ENST00000487496 FAM200BP0CF97 657 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 GJA4P35212 333 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 CCR3P51677 355 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 UBE2HP62256 183 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 AMPD2Q01433 879 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 EML3Q32P44 896 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 TMEM196Q5HYL7 178 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 TTI2Q6NXR4 508 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 FOXR2Q6PJQ5 311 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 Q6ZS52 159 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms