RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-241ENST00000487169 MTMR8Q96EF0 704 aa13.87□□□□□ -0.19
HDLBP-241ENST00000487169 EPN3Q9H201 632 aa13.87□□□□□ -0.19
HDLBP-241ENST00000487169 NSMCE4AQ9NXX6 385 aa13.87□□□□□ -0.19
HDLBP-241ENST00000487169 DDX43Q9NXZ2 648 aaKnown RBP13.87□□□□□ -0.19
HDLBP-241ENST00000487169 PKD2L2Q9NZM6 624 aa13.87□□□□□ -0.19
HDLBP-241ENST00000487169 BARX2Q9UMQ3 279 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-241ENST00000487169 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
HDLBP-241ENST00000487169 SLC12A8A0AV02 714 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 H7C4K7 107 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 ENDOD1O94919 500 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 ENO1P06733 434 aaKnown RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 LSP1P33241 339 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 MCL1Q07820 350 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 LVRNQ6Q4G3 990 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 CINPQ9BW66 212 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 MYL2P10916 166 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 DNAJB2P25686 324 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 ARHGAP15Q53QZ3 475 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 SYNPO2Q9UMS6 1093 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 ENO3P13929 434 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 RAG1P15918 1043 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 UBA1P22314 1058 aaKnown RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 HSD17B3P37058 310 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 NFIL3Q16649 462 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 FOXR1Q6PIV2 292 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 KIRREL3Q8IZU9 778 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 KDM4CQ9H3R0 1056 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 CD274Q9NZQ7 290 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 WARS2Q9UGM6 360 aaKnown RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 DSEQ9UL01 958 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 MEIS2O14770 477 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.193e-6■■□□□ 14.5
HDLBP-241ENST00000487169 DNAJC8O75937 253 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 CYP3A4P08684 503 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 FDFT1P37268 417 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 SERPINB4P48594 390 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 AP2B1P63010 937 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 GCNT1Q02742 428 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 BST2Q10589 180 aaKnown RBP13.86□□□□□ -0.19
HDLBP-241ENST00000487169 EXD1Q8NHP7 514 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 NAT9Q9BTE0 207 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 AKAP12Q02952 1782 aa13.86□□□□□ -0.19
HDLBP-241ENST00000487169 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 PQBP1O60828 265 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 SETSIPP0DME0 302 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 HIC1Q14526 733 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 NT5DC1Q5TFE4 455 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 PAPD7Q5XG87 772 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 RIBC1Q8N443 379 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ERP27Q96DN0 273 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 TRIM4Q9C037 500 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ITGA11Q9UKX5 1188 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 PEAK1Q9H792 1746 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■■■□ 24.6
HDLBP-241ENST00000487169 KRT34O76011 436 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 FBXO21O94952 628 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 MEI1Q5TIA1 1274 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 IQSEC1Q6DN90 963 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 DENND5BQ6ZUT9 1274 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 CASKIN2Q8WXE0 1202 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 EDEM1Q92611 657 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 PNKPQ96T60 521 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 RHOBTB1O94844 696 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 IRAK1P51617 712 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 GEMP55040 296 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 POLE2P56282 527 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ABCE1P61221 599 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 DNAJC3Q13217 504 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 MFSD10Q14728 455 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 PDCD2Q16342 344 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 CATSPERGQ6ZRH7 1159 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 ZNF473Q8WTR7 871 aaKnown RBP13.85□□□□□ -0.19
HDLBP-241ENST00000487169 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
HDLBP-241ENST00000487169 TISP43B9A030 160 aa13.84□□□□□ -0.19
HDLBP-241ENST00000487169 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
HDLBP-241ENST00000487169 FSCN1Q16658 493 aaKnown RBP13.84□□□□□ -0.19
HDLBP-241ENST00000487169 CLEC16AQ2KHT3 1053 aa13.84□□□□□ -0.19
HDLBP-241ENST00000487169 MRNIPQ6NTE8 343 aa13.84□□□□□ -0.19
HDLBP-241ENST00000487169 PACS2Q86VP3 889 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms